| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is gtaB [H]
Identifier: 21227235
GI number: 21227235
Start: 1336385
End: 1337356
Strand: Reverse
Name: gtaB [H]
Synonym: MM_1133
Alternate gene names: 21227235
Gene position: 1337356-1336385 (Counterclockwise)
Preceding gene: 21227237
Following gene: 21227233
Centisome position: 32.65
GC content: 43.21
Gene sequence:
>972_bases ATGGGTGAAAAGTACTTTAACTCAGAAGAATACAACCTTACAGAATTTCTTTTCATTGGAGAATTAACCTTGACTATCAA AAAAGCACTTATCCCGGCAGCCGGTCTTGGGACTCGCTTTCTGCCGGCAACAAAGTCAATGCCAAAAGAAATGCTTCCTA TAATTGACACACCTGTAATTCAGTATGTAGTGGAGGAAGCTATTGCCTCAGGCATAGAAGATATTATTATTATTACAGGC AGGGGCAAGAGAGCAATTGAGGACTACTTCGATGATTCTCCGGAACTTGAGATGCATCTTGCTAAAAAACACCAGACAGA TATGCTGAAACTGGTCCGGGACATCTCTTCTCTTGTAGATATCCACTACATCCGCCAGAAAGAGCCCAATGGGCTTGGAG ATGCGGTATTAAGGGCAGAAAACCATATCGGAGACGAGCCTTTTGCGGTGCTTCTCGGAGACGATATTATCGTTAACGAC AAACCCTGCACTGCCCAGCTTATTGAGAACTTTGAGAAATACGGGAGGTCAACAATCGCAGTTGAAGAGGTCCCTTACGA AAAACTGAGCAGTTATGGAATTATAAAAGGCAAGCCCCTCGATGATTCCCTTTATGTTCTTGAAGACATTGTAGAAAAAC CAGCACCTGAAGATGCTCCTTCCAATATAGGAGCAATAGGGCGCTATGTATTCACGCCTGAGATTTTTGACTGCATAAAG CATGCCGGTACTGGCGTTGGAAGTGAAATACAGCTCACAGACGGTATCAGGCTCCTTAACAAATCCCAGATGATCTATGC CTGCAGATTTAAGGGAAAAAGGTTCGATACAGGAGACCGGCTCGGGTACGTAAAATCCATAGTCGATTTTGCTCTCCAGA ACGAAAACCTCAGGGACGATGTGCTTGAATACCTTCGGGAAATTCTCGCAGTTAATAAGATTTCTCCAGAAATAGATAAG TTAAAACAATAA
Upstream 100 bases:
>100_bases CTTCTTTTTATTAATACTTTGCACTATTTTTTGCAAAAGCTGTAATTCTTTTTTCATACAATATGGGACTTTGCATAGAA ATAGGGGAAAAATTAAAGTT
Downstream 100 bases:
>100_bases TGCCGGAGAGACCTGAAAAATCAGGATATAATAAGCATCAGACAAAGGATACTTAAAAATAAATAAAAACAATAAATCTA TGATATTGGTATATGGAAAG
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGEKYFNSEEYNLTEFLFIGELTLTIKKALIPAAGLGTRFLPATKSMPKEMLPIIDTPVIQYVVEEAIASGIEDIIIITG RGKRAIEDYFDDSPELEMHLAKKHQTDMLKLVRDISSLVDIHYIRQKEPNGLGDAVLRAENHIGDEPFAVLLGDDIIVND KPCTAQLIENFEKYGRSTIAVEEVPYEKLSSYGIIKGKPLDDSLYVLEDIVEKPAPEDAPSNIGAIGRYVFTPEIFDCIK HAGTGVGSEIQLTDGIRLLNKSQMIYACRFKGKRFDTGDRLGYVKSIVDFALQNENLRDDVLEYLREILAVNKISPEIDK LKQ
Sequences:
>Translated_323_residues MGEKYFNSEEYNLTEFLFIGELTLTIKKALIPAAGLGTRFLPATKSMPKEMLPIIDTPVIQYVVEEAIASGIEDIIIITG RGKRAIEDYFDDSPELEMHLAKKHQTDMLKLVRDISSLVDIHYIRQKEPNGLGDAVLRAENHIGDEPFAVLLGDDIIVND KPCTAQLIENFEKYGRSTIAVEEVPYEKLSSYGIIKGKPLDDSLYVLEDIVEKPAPEDAPSNIGAIGRYVFTPEIFDCIK HAGTGVGSEIQLTDGIRLLNKSQMIYACRFKGKRFDTGDRLGYVKSIVDFALQNENLRDDVLEYLREILAVNKISPEIDK LKQ >Mature_322_residues GEKYFNSEEYNLTEFLFIGELTLTIKKALIPAAGLGTRFLPATKSMPKEMLPIIDTPVIQYVVEEAIASGIEDIIIITGR GKRAIEDYFDDSPELEMHLAKKHQTDMLKLVRDISSLVDIHYIRQKEPNGLGDAVLRAENHIGDEPFAVLLGDDIIVNDK PCTAQLIENFEKYGRSTIAVEEVPYEKLSSYGIIKGKPLDDSLYVLEDIVEKPAPEDAPSNIGAIGRYVFTPEIFDCIKH AGTGVGSEIQLTDGIRLLNKSQMIYACRFKGKRFDTGDRLGYVKSIVDFALQNENLRDDVLEYLREILAVNKISPEIDKL KQ
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=304, Percent_Identity=40.1315789473684, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI1788355, Length=282, Percent_Identity=40.0709219858156, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1788351, Length=258, Percent_Identity=25.968992248062, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790224, Length=230, Percent_Identity=25.2173913043478, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 36228; Mature: 36097
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEKYFNSEEYNLTEFLFIGELTLTIKKALIPAAGLGTRFLPATKSMPKEMLPIIDTPVI CCCCCCCCCCCCHHHEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHH QYVVEEAIASGIEDIIIITGRGKRAIEDYFDDSPELEMHLAKKHQTDMLKLVRDISSLVD HHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IHYIRQKEPNGLGDAVLRAENHIGDEPFAVLLGDDIIVNDKPCTAQLIENFEKYGRSTIA HHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHCCCEEE VEEVPYEKLSSYGIIKGKPLDDSLYVLEDIVEKPAPEDAPSNIGAIGRYVFTPEIFDCIK EHHCCHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEECHHHHHHHH HAGTGVGSEIQLTDGIRLLNKSQMIYACRFKGKRFDTGDRLGYVKSIVDFALQNENLRDD HHCCCCCCEEEECCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHH VLEYLREILAVNKISPEIDKLKQ HHHHHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure GEKYFNSEEYNLTEFLFIGELTLTIKKALIPAAGLGTRFLPATKSMPKEMLPIIDTPVI CCCCCCCCCCCHHHEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHH QYVVEEAIASGIEDIIIITGRGKRAIEDYFDDSPELEMHLAKKHQTDMLKLVRDISSLVD HHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IHYIRQKEPNGLGDAVLRAENHIGDEPFAVLLGDDIIVNDKPCTAQLIENFEKYGRSTIA HHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHCCCEEE VEEVPYEKLSSYGIIKGKPLDDSLYVLEDIVEKPAPEDAPSNIGAIGRYVFTPEIFDCIK EHHCCHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEECHHHHHHHH HAGTGVGSEIQLTDGIRLLNKSQMIYACRFKGKRFDTGDRLGYVKSIVDFALQNENLRDD HHCCCCCCEEEECCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHH VLEYLREILAVNKISPEIDKLKQ HHHHHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]