| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227233
Identifier: 21227233
GI number: 21227233
Start: 1334456
End: 1334746
Strand: Reverse
Name: 21227233
Synonym: MM_1131
Alternate gene names: NA
Gene position: 1334746-1334456 (Counterclockwise)
Preceding gene: 21227235
Following gene: 21227232
Centisome position: 32.58
GC content: 38.83
Gene sequence:
>291_bases GTGCTTTCAATGCTGGCTCTGGGTTCAGAAAAACTGATGATGGGGAATAATTTTCCCGGTTCAGGCGTCTGTTTTGTTTA TACGGACTTTGGAATACCTGAATATTACAGGATAATAGTCCTGGGACTGATAGCCCTTGTGGGAATAAAAGAAATGCTTC TGACTTCCAGAAAAGAAGATCATTTTTCTATAGACTCTATTGATATTGGAATATTCCCGCTACTAATTTGCTTTGTCGCT AACTTTCTTTTTGCAGGCCTGGAAATTATTTTTACAGGGTTATCTCCCTGA
Upstream 100 bases:
>100_bases TCTGTTCAAATATTTATATAGTTTGACAGTTTATAGGTTTCTATAGTTAGAATTTAGTATATGTTTTAACAATACCTTTA CCAATTATGGGGGATTTGCA
Downstream 100 bases:
>100_bases CCCCTCTCATTTTTTACATCACTCCTATTTTTCTTTCATTATCCCGGAAGAATTCCATATTAAAATCTCAGAATGCCGTG AGAGGTTATTCTTCTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLSMLALGSEKLMMGNNFPGSGVCFVYTDFGIPEYYRIIVLGLIALVGIKEMLLTSRKEDHFSIDSIDIGIFPLLICFVA NFLFAGLEIIFTGLSP
Sequences:
>Translated_96_residues MLSMLALGSEKLMMGNNFPGSGVCFVYTDFGIPEYYRIIVLGLIALVGIKEMLLTSRKEDHFSIDSIDIGIFPLLICFVA NFLFAGLEIIFTGLSP >Mature_96_residues MLSMLALGSEKLMMGNNFPGSGVCFVYTDFGIPEYYRIIVLGLIALVGIKEMLLTSRKEDHFSIDSIDIGIFPLLICFVA NFLFAGLEIIFTGLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10571; Mature: 10571
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSMLALGSEKLMMGNNFPGSGVCFVYTDFGIPEYYRIIVLGLIALVGIKEMLLTSRKED CCCCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC HFSIDSIDIGIFPLLICFVANFLFAGLEIIFTGLSP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLSMLALGSEKLMMGNNFPGSGVCFVYTDFGIPEYYRIIVLGLIALVGIKEMLLTSRKED CCCCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC HFSIDSIDIGIFPLLICFVANFLFAGLEIIFTGLSP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA