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The map label for this gene is wcaL [C]

Identifier: 21227228

GI number: 21227228

Start: 1329585

End: 1330799

Strand: Reverse

Name: wcaL [C]

Synonym: MM_1126

Alternate gene names: 21227228

Gene position: 1330799-1329585 (Counterclockwise)

Preceding gene: 21227229

Following gene: 21227227

Centisome position: 32.49

GC content: 46.01

Gene sequence:

>1215_bases
ATGAAAATGCTCTTTCTGGACATCGTGTGGCCTCTTTACCTGGCTGACGGGTCGCTTATTCACAGGCATGAACTTGTAAG
CAACCTGGCAGAGCTGGAGAATGAAGTTCATATCTTCACCACGGATAGTTCTACTCTTTCACATCTTGATAATATCCGCT
GTCATTACGTAAGGCCCGGAAGCCTGCTCGCTCTTACTATTAATTATTTCAGGAACTCTGCGGGCCTGGTCAGTTCCGAA
ACTTTTGACGTACTCTATACCAGAAACCCCAATTTCGGCTTTCTTGCCGGGATCTTCTGCAGGAGCAGGTGTAAAGCCCT
GGTTTATGAATTGAATGGAATTCCAGAGGACGAGACAAGTCTTATAAAATCAAGACATGGTGAAGCACAATCTTTGCAGG
GCAATAGAAAAGGCAGTTTTTCCGGGTATTTTTCTTCTGCCAAATCAAGGTTAAAGGTTCTGGTTCTGAAAAAAGCCCTT
GGGTTTTCGGATAAGATTATAGCTGTGACTCCTGGAATAAAAGAGAATCTTGAGAGTGTTTACGGGATTCCCGGTGAGAA
AATAACCGTGGTGCCCAACGGAGCAAATACTACTATGTTTAAACCTCTTGAGCCGGGCTCATGCAGAAAAGAACTCGGGC
TTGACCCGGGATCTCCTTATGTCTGCTTCGTGGGAAACCTCGCCCCCTGGCAGGGAGTTGAGTATCTTGTACAGGCAGCT
CCTTCAATACTCTCCAGATACCCTGACTGCCGTTTTCTTATTGTCGGTGACGGAGTTATGAAGAATGAACTTTTAAACCT
CTCAAGAGATCTTGGGGTTGATGGCAGATTTATTTTTACAGGCGTGGTCCCTTATGACCGCGTACCGGTCTATATCAATG
CAAGCGATGTCTGCGCCGCCCCCTTTATCCTGGCAAGAAATGCAAAAATAGGGCTTTCTCCTCTGAAATTGTATGAGTAT
ATGGCATGTGGAAAGCCGGTTGTTGCAAGTGCGATCAGCGGGGTCGCCGATGCTCTCAAGGCTTCAGAAGGCGGTTTCTC
AGTCCCTCCGGAAAATCACGAAGCTCTCGCGAAGGCTATTTTGAAGCTTCTTGAAAACCGGGAATTGAGAGAGAAAATGG
GCTCAAAAGGTTTAAGTTATGTTACTGAAAATTACAGCTGGTACAGCGTTGCTAAAAAGGTAGACAGAGTCTGCAAATCC
GGACTCAAGGATTGA

Upstream 100 bases:

>100_bases
GAGTTTCGGGAGTTTTAAACAACAATTCTACAGAGCCCGAGCAGGGAGAGCAATGATCACTTTAAAATATTTTAATAGAG
TATTTTGTTAAGGTGATTGT

Downstream 100 bases:

>100_bases
TACACGAAATTCATCTTTCTACTAATTTCATAACTTATTGAAGATATAACTATTATCTCTTAAACGGGGCTTAAAATGGA
CGAAATTGAAGTCAGAGAAT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKMLFLDIVWPLYLADGSLIHRHELVSNLAELENEVHIFTTDSSTLSHLDNIRCHYVRPGSLLALTINYFRNSAGLVSSE
TFDVLYTRNPNFGFLAGIFCRSRCKALVYELNGIPEDETSLIKSRHGEAQSLQGNRKGSFSGYFSSAKSRLKVLVLKKAL
GFSDKIIAVTPGIKENLESVYGIPGEKITVVPNGANTTMFKPLEPGSCRKELGLDPGSPYVCFVGNLAPWQGVEYLVQAA
PSILSRYPDCRFLIVGDGVMKNELLNLSRDLGVDGRFIFTGVVPYDRVPVYINASDVCAAPFILARNAKIGLSPLKLYEY
MACGKPVVASAISGVADALKASEGGFSVPPENHEALAKAILKLLENRELREKMGSKGLSYVTENYSWYSVAKKVDRVCKS
GLKD

Sequences:

>Translated_404_residues
MKMLFLDIVWPLYLADGSLIHRHELVSNLAELENEVHIFTTDSSTLSHLDNIRCHYVRPGSLLALTINYFRNSAGLVSSE
TFDVLYTRNPNFGFLAGIFCRSRCKALVYELNGIPEDETSLIKSRHGEAQSLQGNRKGSFSGYFSSAKSRLKVLVLKKAL
GFSDKIIAVTPGIKENLESVYGIPGEKITVVPNGANTTMFKPLEPGSCRKELGLDPGSPYVCFVGNLAPWQGVEYLVQAA
PSILSRYPDCRFLIVGDGVMKNELLNLSRDLGVDGRFIFTGVVPYDRVPVYINASDVCAAPFILARNAKIGLSPLKLYEY
MACGKPVVASAISGVADALKASEGGFSVPPENHEALAKAILKLLENRELREKMGSKGLSYVTENYSWYSVAKKVDRVCKS
GLKD
>Mature_404_residues
MKMLFLDIVWPLYLADGSLIHRHELVSNLAELENEVHIFTTDSSTLSHLDNIRCHYVRPGSLLALTINYFRNSAGLVSSE
TFDVLYTRNPNFGFLAGIFCRSRCKALVYELNGIPEDETSLIKSRHGEAQSLQGNRKGSFSGYFSSAKSRLKVLVLKKAL
GFSDKIIAVTPGIKENLESVYGIPGEKITVVPNGANTTMFKPLEPGSCRKELGLDPGSPYVCFVGNLAPWQGVEYLVQAA
PSILSRYPDCRFLIVGDGVMKNELLNLSRDLGVDGRFIFTGVVPYDRVPVYINASDVCAAPFILARNAKIGLSPLKLYEY
MACGKPVVASAISGVADALKASEGGFSVPPENHEALAKAILKLLENRELREKMGSKGLSYVTENYSWYSVAKKVDRVCKS
GLKD

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=266, Percent_Identity=23.6842105263158, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44347; Mature: 44347

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLFLDIVWPLYLADGSLIHRHELVSNLAELENEVHIFTTDSSTLSHLDNIRCHYVRPG
CEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCEEEEECCC
SLLALTINYFRNSAGLVSSETFDVLYTRNPNFGFLAGIFCRSRCKALVYELNGIPEDETS
CEEEEEEEHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LIKSRHGEAQSLQGNRKGSFSGYFSSAKSRLKVLVLKKALGFSDKIIAVTPGIKENLESV
HHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
YGIPGEKITVVPNGANTTMFKPLEPGSCRKELGLDPGSPYVCFVGNLAPWQGVEYLVQAA
HCCCCCEEEEEECCCCCCEECCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH
PSILSRYPDCRFLIVGDGVMKNELLNLSRDLGVDGRFIFTGVVPYDRVPVYINASDVCAA
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCHHHC
PFILARNAKIGLSPLKLYEYMACGKPVVASAISGVADALKASEGGFSVPPENHEALAKAI
CEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LKLLENRELREKMGSKGLSYVTENYSWYSVAKKVDRVCKSGLKD
HHHHHCCHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKMLFLDIVWPLYLADGSLIHRHELVSNLAELENEVHIFTTDSSTLSHLDNIRCHYVRPG
CEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCEEEEECCC
SLLALTINYFRNSAGLVSSETFDVLYTRNPNFGFLAGIFCRSRCKALVYELNGIPEDETS
CEEEEEEEHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LIKSRHGEAQSLQGNRKGSFSGYFSSAKSRLKVLVLKKALGFSDKIIAVTPGIKENLESV
HHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
YGIPGEKITVVPNGANTTMFKPLEPGSCRKELGLDPGSPYVCFVGNLAPWQGVEYLVQAA
HCCCCCEEEEEECCCCCCEECCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH
PSILSRYPDCRFLIVGDGVMKNELLNLSRDLGVDGRFIFTGVVPYDRVPVYINASDVCAA
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCHHHC
PFILARNAKIGLSPLKLYEYMACGKPVVASAISGVADALKASEGGFSVPPENHEALAKAI
CEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LKLLENRELREKMGSKGLSYVTENYSWYSVAKKVDRVCKSGLKD
HHHHHCCHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]