| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227227
Identifier: 21227227
GI number: 21227227
Start: 1328502
End: 1329509
Strand: Reverse
Name: 21227227
Synonym: MM_1125
Alternate gene names: NA
Gene position: 1329509-1328502 (Counterclockwise)
Preceding gene: 21227228
Following gene: 21227223
Centisome position: 32.46
GC content: 41.57
Gene sequence:
>1008_bases ATGGACGAAATTGAAGTCAGAGAATTAGTACCGTCTGAATACAAAGAATGGGATTTGCTTGTTGAAAAAGCTCAACCCGG TACGCTCTTTCATACCAGTGACTGGCTGGGAATTTGCAGAGATGTCCTTTCCAGAGACTTAAGGATTTATGGCTGCTTCA GGAATGGCGAACTTGTAGGGGGATGTCCCATTTTCATTAAAAATATTAAAGGAATGGTGAAAATAGCATCCTCCACCTGT AATATGACTGATTATTGCGGTCCCCTCATAAAAGAAGGGGGGAGTTCTAAAGTCAGCAAACGTATGCAGGACACGCACGA GATTTTAGGAGCTCTCAGGGAATTCCTCTGCAAGCAGGGGTTTGACAGCATTACTCTAACACTTGCCCCGGGGCTTGAGG ATGTAAGACCTTTTACCTGGAAAGGATGGGAATCGAGTGTGTATTATACTCACCACCTGGACCTTAAAGAAAATGTAGAC AGCAATCTCTCCAGGAAAATCCGGAGAGAACTTAAGAGCGCTGAGGAAGCAGGCCTTAAAACAAGAATCTCAAATGACCC TGAAACTTATTATCACCTTCTTTCTCTTGTATATGATAAACAGAATCTGAAGCCCCCTGTACCAAAGGAATTCTTTGAAA GAGTGTTTAAATTGGTAGCGGAAAAAGATGCTGGCTATATGTTTGTCTCGGAGACTCCTGAAGGTGAAGCAGTTGCATCT CATCTGAACCTGTATGGTAAGAAGTGCACTGTCACCTGGTCTTCAGCCCTTAACCCCGATTTTGGCAGAATGGGTCCAAA TGCGCTTTTATATTATAATGAGTTTCTCGACCTTAAATCCAGAAATTTTGAATATATGAACGTAATGGCAGCAAACATTC CAAGATTTACGGACTTTATTATGGGATTTTCTCCAAAGATTGTTCCTTATTATAGAGTAACCCTCCGCAGCAAAAAGTAT TCTCTCATGAGGATATTATATCAGGCTACGCATGAAGAAAATGAATGA
Upstream 100 bases:
>100_bases CTGCAAATCCGGACTCAAGGATTGATACACGAAATTCATCTTTCTACTAATTTCATAACTTATTGAAGATATAACTATTA TCTCTTAAACGGGGCTTAAA
Downstream 100 bases:
>100_bases TTGGGGAATAGAAGGAATTCTTTTCCTGGAAATCAGGTAAACTGAAAAACTGATATCAGGCTCTTTTCCCTGATCTGATT TATTAAAAATTTGTAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MDEIEVRELVPSEYKEWDLLVEKAQPGTLFHTSDWLGICRDVLSRDLRIYGCFRNGELVGGCPIFIKNIKGMVKIASSTC NMTDYCGPLIKEGGSSKVSKRMQDTHEILGALREFLCKQGFDSITLTLAPGLEDVRPFTWKGWESSVYYTHHLDLKENVD SNLSRKIRRELKSAEEAGLKTRISNDPETYYHLLSLVYDKQNLKPPVPKEFFERVFKLVAEKDAGYMFVSETPEGEAVAS HLNLYGKKCTVTWSSALNPDFGRMGPNALLYYNEFLDLKSRNFEYMNVMAANIPRFTDFIMGFSPKIVPYYRVTLRSKKY SLMRILYQATHEENE
Sequences:
>Translated_335_residues MDEIEVRELVPSEYKEWDLLVEKAQPGTLFHTSDWLGICRDVLSRDLRIYGCFRNGELVGGCPIFIKNIKGMVKIASSTC NMTDYCGPLIKEGGSSKVSKRMQDTHEILGALREFLCKQGFDSITLTLAPGLEDVRPFTWKGWESSVYYTHHLDLKENVD SNLSRKIRRELKSAEEAGLKTRISNDPETYYHLLSLVYDKQNLKPPVPKEFFERVFKLVAEKDAGYMFVSETPEGEAVAS HLNLYGKKCTVTWSSALNPDFGRMGPNALLYYNEFLDLKSRNFEYMNVMAANIPRFTDFIMGFSPKIVPYYRVTLRSKKY SLMRILYQATHEENE >Mature_335_residues MDEIEVRELVPSEYKEWDLLVEKAQPGTLFHTSDWLGICRDVLSRDLRIYGCFRNGELVGGCPIFIKNIKGMVKIASSTC NMTDYCGPLIKEGGSSKVSKRMQDTHEILGALREFLCKQGFDSITLTLAPGLEDVRPFTWKGWESSVYYTHHLDLKENVD SNLSRKIRRELKSAEEAGLKTRISNDPETYYHLLSLVYDKQNLKPPVPKEFFERVFKLVAEKDAGYMFVSETPEGEAVAS HLNLYGKKCTVTWSSALNPDFGRMGPNALLYYNEFLDLKSRNFEYMNVMAANIPRFTDFIMGFSPKIVPYYRVTLRSKKY SLMRILYQATHEENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38549; Mature: 38549
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIEVRELVPSEYKEWDLLVEKAQPGTLFHTSDWLGICRDVLSRDLRIYGCFRNGELVG CCCCHHHHHCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCEEEEEEECCCCEEC GCPIFIKNIKGMVKIASSTCNMTDYCGPLIKEGGSSKVSKRMQDTHEILGALREFLCKQG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC FDSITLTLAPGLEDVRPFTWKGWESSVYYTHHLDLKENVDSNLSRKIRRELKSAEEAGLK CCEEEEEECCCHHHCCCCEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCH TRISNDPETYYHLLSLVYDKQNLKPPVPKEFFERVFKLVAEKDAGYMFVSETPEGEAVAS HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH HLNLYGKKCTVTWSSALNPDFGRMGPNALLYYNEFLDLKSRNFEYMNVMAANIPRFTDFI HHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHCCCHHHHHH MGFSPKIVPYYRVTLRSKKYSLMRILYQATHEENE HCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDEIEVRELVPSEYKEWDLLVEKAQPGTLFHTSDWLGICRDVLSRDLRIYGCFRNGELVG CCCCHHHHHCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCEEEEEEECCCCEEC GCPIFIKNIKGMVKIASSTCNMTDYCGPLIKEGGSSKVSKRMQDTHEILGALREFLCKQG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC FDSITLTLAPGLEDVRPFTWKGWESSVYYTHHLDLKENVDSNLSRKIRRELKSAEEAGLK CCEEEEEECCCHHHCCCCEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCH TRISNDPETYYHLLSLVYDKQNLKPPVPKEFFERVFKLVAEKDAGYMFVSETPEGEAVAS HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH HLNLYGKKCTVTWSSALNPDFGRMGPNALLYYNEFLDLKSRNFEYMNVMAANIPRFTDFI HHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHCCCHHHHHH MGFSPKIVPYYRVTLRSKKYSLMRILYQATHEENE HCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA