Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227223

Identifier: 21227223

GI number: 21227223

Start: 1320397

End: 1321992

Strand: Reverse

Name: 21227223

Synonym: MM_1121

Alternate gene names: NA

Gene position: 1321992-1320397 (Counterclockwise)

Preceding gene: 21227227

Following gene: 21227219

Centisome position: 32.27

GC content: 45.99

Gene sequence:

>1596_bases
TTGTATTCAGCCCTTACACTTTGTTTCAATTCTTTAATTTCCGATCCTGTTAGTATAGTTTCATCGCCATCTCAACTTTC
CGATAGGCCTCTAAGACATGAGTTTACGGTCCTGATTCCAGCCCAAAATGAGGAGGCTTCCATCGGTAGCAAGGTTCTGC
TTGCGGCGAGTTATGCAGATCGTGTACTTGTGCTTGACAAAGGGTCTACTGACAGAACCATGGAAGTGGCAGCTCTGGGT
GGGGCAAGAGTTATTCCTCTTGCAGGAGGGGAGGAAGCTTTGCTTAAAGTCCTCTACAGGGCGTCACTTGATTCTGAGCT
TGTGGTTCTCATCTATCCGGAGTGCATGCAGGATATAGATTTGCTTTCCCATGTCCTTGAGCCTTTAAGGCAGGGGTTTG
ACCTGTCAGTAGGTTCCTGGCCCTGCCGTGTTTCCTGTGAACAGGAAGCTGTGATGCTTCTTAACGGGAAAAGCACCTTT
AAAGAAAAAATAGGCTTTCTTGCCGTAACCTCAAGGTCACTTCAGAATATAAGTTCAGGCAAAGAGCACATGTCTTTAAA
GTCCCTGCTTTCTGCGGCAAAGACTGAAAAACTTAAGGTTAACTATCTGAGCTTTGATGTCGATCCAGCATTTCGGAAGC
TTGAGAGTACCCGCATAGGAGTTGTTGTTCCTGCATACAACGAAGAACTGCTTATCGGTGAGACTCTCAGCGGAATTCCA
GAGTATGTGGACCGTATATATGTGATTGATGATGGAAGCACTGACCGGACAGGAGAAATAGTCAAAAAGTTCGGAGACTC
GAGAATAGTTTATCTGCGTCACGAGGTAAATAGGGGCGTCGGGGCAGGGATAATTAGCGGGTATAAACTCGCTCTGAAAG
ATGAAATGGATATTGTAGCAGTTATGGCTGGGGATAACCAGATGGATCCTGCCCATCTTCCGAGATTGATCTTTCCGATT
ATCGAAGGACTTGCCGACTATACAAAGGGCAACAGGCTTCTTTCAGACAATTTTATGACCGGGATGAGCAGGTTGAGGTC
TTTTGGAAACCTTCTTCTGAGCTTCCTGACCAAAATAGGAAGTGGATACTGGCACATAATGGACCCACAAAATGGGTACA
CAGCCATTTCCAGGCAGGCTCTTGAAGTTATCGATCTGGATGCAGTCTATCCTTATTACGGGTACTGTAACGACCTGCTG
ATCAAGCTTAATGCCTTTGGAATGAGGGTAATGGATGTGGTCATTCCTGCCCGTTATGGAAGAGAGAAGTCATCTATAAA
ATATAGCAAATATGTCCGTAAGGTCTCACCCATGCTTTTCAGGGGTTTCCTCTGGAGGCTCAGGGTCAAATACACTGTCC
TGGATTTCCATCCCCTTGTGCTATTTTACTTCCTCGGGATGCTCGCATTACCTCTGAGTGTCCTCCTGGCTTTCTGGGGA
ATTTTCCAGCTATTGCTTCAAAACACTCTTCCGTCATATTACCCACTGCTTGGCTTCCTCGTACTGGGTACAGGGCTCCA
GATGCTCCTTTTCGGAATGCTCTTTGACATGCAGGTAGAGAAGAAAAGAAATGAAAGAGTAGGACTTGCTCGTTAA

Upstream 100 bases:

>100_bases
ATTCCAAATATCTTTCAAATGATAGCCTTTAATATTTTTGCATTTATACACATACTGGGGGTTATAGTATAATGCATACT
CATAAGGGGGTGGAGAGGGT

Downstream 100 bases:

>100_bases
GGTCTGGAATTTATCTCCCAGATCTTTTTCTATTTATTTTAATCATCATTAAGAGCCTGAATATCTATTGATTTTTCTAC
ATATCTTTGTCCGCTTGTTA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MYSALTLCFNSLISDPVSIVSSPSQLSDRPLRHEFTVLIPAQNEEASIGSKVLLAASYADRVLVLDKGSTDRTMEVAALG
GARVIPLAGGEEALLKVLYRASLDSELVVLIYPECMQDIDLLSHVLEPLRQGFDLSVGSWPCRVSCEQEAVMLLNGKSTF
KEKIGFLAVTSRSLQNISSGKEHMSLKSLLSAAKTEKLKVNYLSFDVDPAFRKLESTRIGVVVPAYNEELLIGETLSGIP
EYVDRIYVIDDGSTDRTGEIVKKFGDSRIVYLRHEVNRGVGAGIISGYKLALKDEMDIVAVMAGDNQMDPAHLPRLIFPI
IEGLADYTKGNRLLSDNFMTGMSRLRSFGNLLLSFLTKIGSGYWHIMDPQNGYTAISRQALEVIDLDAVYPYYGYCNDLL
IKLNAFGMRVMDVVIPARYGREKSSIKYSKYVRKVSPMLFRGFLWRLRVKYTVLDFHPLVLFYFLGMLALPLSVLLAFWG
IFQLLLQNTLPSYYPLLGFLVLGTGLQMLLFGMLFDMQVEKKRNERVGLAR

Sequences:

>Translated_531_residues
MYSALTLCFNSLISDPVSIVSSPSQLSDRPLRHEFTVLIPAQNEEASIGSKVLLAASYADRVLVLDKGSTDRTMEVAALG
GARVIPLAGGEEALLKVLYRASLDSELVVLIYPECMQDIDLLSHVLEPLRQGFDLSVGSWPCRVSCEQEAVMLLNGKSTF
KEKIGFLAVTSRSLQNISSGKEHMSLKSLLSAAKTEKLKVNYLSFDVDPAFRKLESTRIGVVVPAYNEELLIGETLSGIP
EYVDRIYVIDDGSTDRTGEIVKKFGDSRIVYLRHEVNRGVGAGIISGYKLALKDEMDIVAVMAGDNQMDPAHLPRLIFPI
IEGLADYTKGNRLLSDNFMTGMSRLRSFGNLLLSFLTKIGSGYWHIMDPQNGYTAISRQALEVIDLDAVYPYYGYCNDLL
IKLNAFGMRVMDVVIPARYGREKSSIKYSKYVRKVSPMLFRGFLWRLRVKYTVLDFHPLVLFYFLGMLALPLSVLLAFWG
IFQLLLQNTLPSYYPLLGFLVLGTGLQMLLFGMLFDMQVEKKRNERVGLAR
>Mature_531_residues
MYSALTLCFNSLISDPVSIVSSPSQLSDRPLRHEFTVLIPAQNEEASIGSKVLLAASYADRVLVLDKGSTDRTMEVAALG
GARVIPLAGGEEALLKVLYRASLDSELVVLIYPECMQDIDLLSHVLEPLRQGFDLSVGSWPCRVSCEQEAVMLLNGKSTF
KEKIGFLAVTSRSLQNISSGKEHMSLKSLLSAAKTEKLKVNYLSFDVDPAFRKLESTRIGVVVPAYNEELLIGETLSGIP
EYVDRIYVIDDGSTDRTGEIVKKFGDSRIVYLRHEVNRGVGAGIISGYKLALKDEMDIVAVMAGDNQMDPAHLPRLIFPI
IEGLADYTKGNRLLSDNFMTGMSRLRSFGNLLLSFLTKIGSGYWHIMDPQNGYTAISRQALEVIDLDAVYPYYGYCNDLL
IKLNAFGMRVMDVVIPARYGREKSSIKYSKYVRKVSPMLFRGFLWRLRVKYTVLDFHPLVLFYFLGMLALPLSVLLAFWG
IFQLLLQNTLPSYYPLLGFLVLGTGLQMLLFGMLFDMQVEKKRNERVGLAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 59333; Mature: 59333

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSALTLCFNSLISDPVSIVSSPSQLSDRPLRHEFTVLIPAQNEEASIGSKVLLAASYAD
CCHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC
RVLVLDKGSTDRTMEVAALGGARVIPLAGGEEALLKVLYRASLDSELVVLIYPECMQDID
EEEEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
LLSHVLEPLRQGFDLSVGSWPCRVSCEQEAVMLLNGKSTFKEKIGFLAVTSRSLQNISSG
HHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHCCCEEEHHHHHHHHCC
KEHMSLKSLLSAAKTEKLKVNYLSFDVDPAFRKLESTRIGVVVPAYNEELLIGETLSGIP
HHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCCEEEEEEECCCCCEEECCHHHHHH
EYVDRIYVIDDGSTDRTGEIVKKFGDSRIVYLRHEVNRGVGAGIISGYKLALKDEMDIVA
HHHCEEEEEECCCCCCHHHHHHHCCCCEEEEEEEHHCCCCCCHHHCCEEEEEECCCCEEE
VMAGDNQMDPAHLPRLIFPIIEGLADYTKGNRLLSDNFMTGMSRLRSFGNLLLSFLTKIG
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
SGYWHIMDPQNGYTAISRQALEVIDLDAVYPYYGYCNDLLIKLNAFGMRVMDVVIPARYG
CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCC
REKSSIKYSKYVRKVSPMLFRGFLWRLRVKYTVLDFHPLVLFYFLGMLALPLSVLLAFWG
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
IFQLLLQNTLPSYYPLLGFLVLGTGLQMLLFGMLFDMQVEKKRNERVGLAR
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYSALTLCFNSLISDPVSIVSSPSQLSDRPLRHEFTVLIPAQNEEASIGSKVLLAASYAD
CCHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC
RVLVLDKGSTDRTMEVAALGGARVIPLAGGEEALLKVLYRASLDSELVVLIYPECMQDID
EEEEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
LLSHVLEPLRQGFDLSVGSWPCRVSCEQEAVMLLNGKSTFKEKIGFLAVTSRSLQNISSG
HHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHCCCEEEHHHHHHHHCC
KEHMSLKSLLSAAKTEKLKVNYLSFDVDPAFRKLESTRIGVVVPAYNEELLIGETLSGIP
HHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCCEEEEEEECCCCCEEECCHHHHHH
EYVDRIYVIDDGSTDRTGEIVKKFGDSRIVYLRHEVNRGVGAGIISGYKLALKDEMDIVA
HHHCEEEEEECCCCCCHHHHHHHCCCCEEEEEEEHHCCCCCCHHHCCEEEEEECCCCEEE
VMAGDNQMDPAHLPRLIFPIIEGLADYTKGNRLLSDNFMTGMSRLRSFGNLLLSFLTKIG
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
SGYWHIMDPQNGYTAISRQALEVIDLDAVYPYYGYCNDLLIKLNAFGMRVMDVVIPARYG
CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCC
REKSSIKYSKYVRKVSPMLFRGFLWRLRVKYTVLDFHPLVLFYFLGMLALPLSVLLAFWG
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
IFQLLLQNTLPSYYPLLGFLVLGTGLQMLLFGMLFDMQVEKKRNERVGLAR
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]