| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227222
Identifier: 21227222
GI number: 21227222
Start: 1318036
End: 1320132
Strand: Direct
Name: 21227222
Synonym: MM_1120
Alternate gene names: NA
Gene position: 1318036-1320132 (Clockwise)
Preceding gene: 21227221
Following gene: 21227224
Centisome position: 32.18
GC content: 39.96
Gene sequence:
>2097_bases ATGAACGAAAATAACTGGATACATAGACAGGGAGAAAAAAAGAATAAAGGAATCCTGATTTTAATTCTTATTATTCTGGT CGCAGGTGTAACTATTACCCTTTCAACTTCCCAAACCGAAATGACGGTTTACGTAAGTACTGACGGGAGTGGGGATTTCA ACTGTGATGGCACCGATGACCATATAGAGATTAATGAAGCCCTCGCATATGTAGCAGAAAACCCTGAGTTTACAACAGTT CATTTGAAAGGTCCAAACACATACTTGATCTCAGACAGCATTTTTGTGGGGAGCAATACTATCCTGGAAGGGGACCCTAC AGCCGTGATAAAACTTAAGGATAAAGCAGACTGGCCATTGGAGAAGCCCCTTATCACCCAGAGAGACAGCTCGGAAAGCC AGAATATTACTGTAAAAGGTTTTGAAATTGACGGGAACCATGATGGGAATAGAGAAAAAAGCAGGGGAAAAGGATATCAT AACCTGGTTCACTTCCTGAACTGCAAAAATATCAGAGTTTATGATATGTACATGCACGACAGCCATGGAGATGGGTTGAA AGTTGTAAAAGGCTCTGATATCCAGTTTTATAATAACACAGTATATAAAGTCGGGCATGATGCTCTTTATATCATCTACA GTTCAGACATAGGGGCATGGAACAATAAAATAACATGCAGAACAAATAGCGGGCTCAGGGTATATAATGGAAATCATGTG AAATTCTATAATAATATCATTAATTCCGAGGGAGAAGGGGGAGCCGGAATTGAGATCCAGAAAACGGGTTCTTCAACGGT AATGGATGATATTGAGATTTATAATAACCTGCTGTACGAGACAAATGCAGCAGGGATCTGGATTACTGGTTACGGGCCTG CATATTCAAAAGATTCCGCAAAAGATGTATACATACACAATAACAGATTTTACAAAACCGGAATTAATCCTGGCGCTGCC TGGGCAGGGGGCGTGGTCCTCAACGGATTTTATAATACCCTTATAGAAGACAATGTATTCGATGGGTGCTACGGAGCGGC AATTGCCCATAAACAGGTAGATGAAGAGTTTTCATCTCCGGGATCAGATTATACGACCACTGCTAGAAATAATATAATAA TTAATACCCGGTCAAGTCCTACAGCCGGAGAAGGTTATGCATTTTATAATCAGTTAGAAGACAGTCATTCATTTATCCTA CAAAATAACTGTCTCCTGAACAATGCCGGTGGGAACTATATGCATGCTGAATCTACATCGGACAGAGAAGCCACCCCCGA ACTGATAGAGCAGCTGAATAAAGACGACCCTTCAGAGATACAGGATTTGCCCTGTGCGGAGGCGATAAAGTCCGGCCCAC AGAATATATCGTATGAAATAGATGACGGCATTGATATAGGACAGAAAAAAGGTCTTATATATGAGATAAAAAGAACGATT TCAGAGATTATAAGATCTATAAAAAAGATTTTTTTAAGTTTTATTTCGGGAGAATCTGACAATGAGGAACTTGAAATTGT CTTACCCCTGGTAATCTCAGACAATAGACTGAAGGAAGAAAATCCTGACTCGACGTTGAGGGACACTGAATATATCGACG TTGGAGAAAGCCCGGATGGCGGGAAGTACAGAGGAGTTATACTTTTTGAGCTGGGACAACTGAATAAAACAAATAAAATT GAAAAAGCAACTCTTTCTCTATTCTGGTATTACCCCGAAGAATCCCGAAAGGAAGATACTATTCTCGAAGTATACAGGCC TGAAAAATGGTGTGAAGAACATATTTCATGGGGCGCGAGAGAAATAAACACTCCATGGAAAAATCCAGGAGGGGACTGGT ACGATAAAAATGGAGTATCTCAGGGCAGCACTCCTTATTCCACAATAACTTTTAAGAGCAGTAGTCTTCCTGATAACAGG TATTATGAGCTGGACGTAACAGAGCTTGTAAGGGAATACATTAGCGGGAAATATGAAAATACCGGTTTTCTTATAAAATC CAGAGCGGAAGACAGTGACTATATTGCATTCTACAGTTCGGAATGGCAAAACAAAAATCAGATGCCAAGACTTTCAATAG AATATAAAAATGAATAA
Upstream 100 bases:
>100_bases ATATAAAGGGTTCCATTATTTCTTTTAAATTTATTTTAGATTTCCACAGATAACTTTTTTTAAGCTTAGAGAGTTATAGT TAAGTGTATTGGGGATACAG
Downstream 100 bases:
>100_bases TATAACAGGGAAATGTGGCGAAAATTATAAGATATGGATATGAGACAGGAAGCATTTAGAAATGCATCATATCTGAAAAT AAAGTCATATCAGATTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 698; Mature: 698
Protein sequence:
>698_residues MNENNWIHRQGEKKNKGILILILIILVAGVTITLSTSQTEMTVYVSTDGSGDFNCDGTDDHIEINEALAYVAENPEFTTV HLKGPNTYLISDSIFVGSNTILEGDPTAVIKLKDKADWPLEKPLITQRDSSESQNITVKGFEIDGNHDGNREKSRGKGYH NLVHFLNCKNIRVYDMYMHDSHGDGLKVVKGSDIQFYNNTVYKVGHDALYIIYSSDIGAWNNKITCRTNSGLRVYNGNHV KFYNNIINSEGEGGAGIEIQKTGSSTVMDDIEIYNNLLYETNAAGIWITGYGPAYSKDSAKDVYIHNNRFYKTGINPGAA WAGGVVLNGFYNTLIEDNVFDGCYGAAIAHKQVDEEFSSPGSDYTTTARNNIIINTRSSPTAGEGYAFYNQLEDSHSFIL QNNCLLNNAGGNYMHAESTSDREATPELIEQLNKDDPSEIQDLPCAEAIKSGPQNISYEIDDGIDIGQKKGLIYEIKRTI SEIIRSIKKIFLSFISGESDNEELEIVLPLVISDNRLKEENPDSTLRDTEYIDVGESPDGGKYRGVILFELGQLNKTNKI EKATLSLFWYYPEESRKEDTILEVYRPEKWCEEHISWGAREINTPWKNPGGDWYDKNGVSQGSTPYSTITFKSSSLPDNR YYELDVTELVREYISGKYENTGFLIKSRAEDSDYIAFYSSEWQNKNQMPRLSIEYKNE
Sequences:
>Translated_698_residues MNENNWIHRQGEKKNKGILILILIILVAGVTITLSTSQTEMTVYVSTDGSGDFNCDGTDDHIEINEALAYVAENPEFTTV HLKGPNTYLISDSIFVGSNTILEGDPTAVIKLKDKADWPLEKPLITQRDSSESQNITVKGFEIDGNHDGNREKSRGKGYH NLVHFLNCKNIRVYDMYMHDSHGDGLKVVKGSDIQFYNNTVYKVGHDALYIIYSSDIGAWNNKITCRTNSGLRVYNGNHV KFYNNIINSEGEGGAGIEIQKTGSSTVMDDIEIYNNLLYETNAAGIWITGYGPAYSKDSAKDVYIHNNRFYKTGINPGAA WAGGVVLNGFYNTLIEDNVFDGCYGAAIAHKQVDEEFSSPGSDYTTTARNNIIINTRSSPTAGEGYAFYNQLEDSHSFIL QNNCLLNNAGGNYMHAESTSDREATPELIEQLNKDDPSEIQDLPCAEAIKSGPQNISYEIDDGIDIGQKKGLIYEIKRTI SEIIRSIKKIFLSFISGESDNEELEIVLPLVISDNRLKEENPDSTLRDTEYIDVGESPDGGKYRGVILFELGQLNKTNKI EKATLSLFWYYPEESRKEDTILEVYRPEKWCEEHISWGAREINTPWKNPGGDWYDKNGVSQGSTPYSTITFKSSSLPDNR YYELDVTELVREYISGKYENTGFLIKSRAEDSDYIAFYSSEWQNKNQMPRLSIEYKNE >Mature_698_residues MNENNWIHRQGEKKNKGILILILIILVAGVTITLSTSQTEMTVYVSTDGSGDFNCDGTDDHIEINEALAYVAENPEFTTV HLKGPNTYLISDSIFVGSNTILEGDPTAVIKLKDKADWPLEKPLITQRDSSESQNITVKGFEIDGNHDGNREKSRGKGYH NLVHFLNCKNIRVYDMYMHDSHGDGLKVVKGSDIQFYNNTVYKVGHDALYIIYSSDIGAWNNKITCRTNSGLRVYNGNHV KFYNNIINSEGEGGAGIEIQKTGSSTVMDDIEIYNNLLYETNAAGIWITGYGPAYSKDSAKDVYIHNNRFYKTGINPGAA WAGGVVLNGFYNTLIEDNVFDGCYGAAIAHKQVDEEFSSPGSDYTTTARNNIIINTRSSPTAGEGYAFYNQLEDSHSFIL QNNCLLNNAGGNYMHAESTSDREATPELIEQLNKDDPSEIQDLPCAEAIKSGPQNISYEIDDGIDIGQKKGLIYEIKRTI SEIIRSIKKIFLSFISGESDNEELEIVLPLVISDNRLKEENPDSTLRDTEYIDVGESPDGGKYRGVILFELGQLNKTNKI EKATLSLFWYYPEESRKEDTILEVYRPEKWCEEHISWGAREINTPWKNPGGDWYDKNGVSQGSTPYSTITFKSSSLPDNR YYELDVTELVREYISGKYENTGFLIKSRAEDSDYIAFYSSEWQNKNQMPRLSIEYKNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78520; Mature: 78520
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENNWIHRQGEKKNKGILILILIILVAGVTITLSTSQTEMTVYVSTDGSGDFNCDGTDD CCCCCCEECCCCCCCCCEEHHHHHHHHCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCC HIEINEALAYVAENPEFTTVHLKGPNTYLISDSIFVGSNTILEGDPTAVIKLKDKADWPL CEEHHHHEEEEECCCCEEEEEEECCCEEEEECEEEECCCEEECCCCEEEEEEECCCCCCC EKPLITQRDSSESQNITVKGFEIDGNHDGNREKSRGKGYHNLVHFLNCKNIRVYDMYMHD CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCCCHHHHHHHCCCCCEEEEEEEEEC SHGDGLKVVKGSDIQFYNNTVYKVGHDALYIIYSSDIGAWNNKITCRTNSGLRVYNGNHV CCCCCEEEEECCCEEEECCEEEEECCCEEEEEEECCCCCCCCEEEEEECCCEEEEECCEE KFYNNIINSEGEGGAGIEIQKTGSSTVMDDIEIYNNLLYETNAAGIWITGYGPAYSKDSA EEEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCC KDVYIHNNRFYKTGINPGAAWAGGVVLNGFYNTLIEDNVFDGCYGAAIAHKQVDEEFSSP CEEEEECCEEEECCCCCCCCCCCCEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC GSDYTTTARNNIIINTRSSPTAGEGYAFYNQLEDSHSFILQNNCLLNNAGGNYMHAESTS CCCCEEECCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEECCEEEECCCCCEEECCCCC DREATPELIEQLNKDDPSEIQDLPCAEAIKSGPQNISYEIDDGIDIGQKKGLIYEIKRTI CCCCCHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH SEIIRSIKKIFLSFISGESDNEELEIVLPLVISDNRLKEENPDSTLRDTEYIDVGESPDG HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCC GKYRGVILFELGQLNKTNKIEKATLSLFWYYPEESRKEDTILEVYRPEKWCEEHISWGAR CCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHCCCCE EINTPWKNPGGDWYDKNGVSQGSTPYSTITFKSSSLPDNRYYELDVTELVREYISGKYEN ECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHCCCCCC TGFLIKSRAEDSDYIAFYSSEWQNKNQMPRLSIEYKNE CCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC >Mature Secondary Structure MNENNWIHRQGEKKNKGILILILIILVAGVTITLSTSQTEMTVYVSTDGSGDFNCDGTDD CCCCCCEECCCCCCCCCEEHHHHHHHHCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCC HIEINEALAYVAENPEFTTVHLKGPNTYLISDSIFVGSNTILEGDPTAVIKLKDKADWPL CEEHHHHEEEEECCCCEEEEEEECCCEEEEECEEEECCCEEECCCCEEEEEEECCCCCCC EKPLITQRDSSESQNITVKGFEIDGNHDGNREKSRGKGYHNLVHFLNCKNIRVYDMYMHD CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCCCHHHHHHHCCCCCEEEEEEEEEC SHGDGLKVVKGSDIQFYNNTVYKVGHDALYIIYSSDIGAWNNKITCRTNSGLRVYNGNHV CCCCCEEEEECCCEEEECCEEEEECCCEEEEEEECCCCCCCCEEEEEECCCEEEEECCEE KFYNNIINSEGEGGAGIEIQKTGSSTVMDDIEIYNNLLYETNAAGIWITGYGPAYSKDSA EEEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCC KDVYIHNNRFYKTGINPGAAWAGGVVLNGFYNTLIEDNVFDGCYGAAIAHKQVDEEFSSP CEEEEECCEEEECCCCCCCCCCCCEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC GSDYTTTARNNIIINTRSSPTAGEGYAFYNQLEDSHSFILQNNCLLNNAGGNYMHAESTS CCCCEEECCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEECCEEEECCCCCEEECCCCC DREATPELIEQLNKDDPSEIQDLPCAEAIKSGPQNISYEIDDGIDIGQKKGLIYEIKRTI CCCCCHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH SEIIRSIKKIFLSFISGESDNEELEIVLPLVISDNRLKEENPDSTLRDTEYIDVGESPDG HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCC GKYRGVILFELGQLNKTNKIEKATLSLFWYYPEESRKEDTILEVYRPEKWCEEHISWGAR CCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHCCCCE EINTPWKNPGGDWYDKNGVSQGSTPYSTITFKSSSLPDNRYYELDVTELVREYISGKYEN ECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHCCCCCC TGFLIKSRAEDSDYIAFYSSEWQNKNQMPRLSIEYKNE CCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA