| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227217
Identifier: 21227217
GI number: 21227217
Start: 1307149
End: 1307688
Strand: Direct
Name: 21227217
Synonym: MM_1115
Alternate gene names: NA
Gene position: 1307149-1307688 (Clockwise)
Preceding gene: 21227216
Following gene: 21227220
Centisome position: 31.91
GC content: 44.26
Gene sequence:
>540_bases ATGTTTATTTTCGGTCATATAGGTATAACCCTGGGAATCTTCTATTTGCTGAGCCGTCTATTTCCGGAAAAGAATATTCC CGTAGATATTAAATGGATAGCTTTTGGAGCACTCCTTCCGGACTTTATTGACAAACCCCTTGGCAGGATAGTCCTTGCTG AGACCATAGGAAGCGGGAGGATATTCGCCCATACCCTTATTTTTGCGATCCTGCTGGGGCTGGCGGCATACTACATCTTT TACCATAAGGGCTGGACTGCCCCCCTGATCATTGCAGGCGCTTCATTCTGTCATGTACTTGAGGATCAGATGTGGAACTC TCCCAGAGCCTTTCTCTGGCCGTTTCTCGGATGGGAGTTTCCAAGAGACACGTTTTCCGGAGGTTTTATTGAATACTTAA TTGGAATCCTTAATCGCTCATACGACCCGGCTTATTCAGGTGTGTTTATTCCGGAAATAATAGGTATAGGAATAATTCTC CTGTTTGCAGGCAACCATATAAGGTCAAAAATGAAAGAAAACCACAGAACAGATTCCTGA
Upstream 100 bases:
>100_bases GTGAATCTGCAGTAATAAAAAATATTTAAAAACTGTGCTGGCATGTCTTTAAGGCAGGCCAGCCAAAAAATAATTATATG GTATATACTTTTTTAATCTG
Downstream 100 bases:
>100_bases CCGAAAAAACACTTTTTTTGACCCAAACGCCTTTTTCAGTTAAATCTAATTGGTTCTTTTTCAGTGAAATGTAATTAGTG CTCACACCACACCTTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGRIFAHTLIFAILLGLAAYYIF YHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEFPRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIIL LFAGNHIRSKMKENHRTDS
Sequences:
>Translated_179_residues MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGRIFAHTLIFAILLGLAAYYIF YHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEFPRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIIL LFAGNHIRSKMKENHRTDS >Mature_179_residues MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGRIFAHTLIFAILLGLAAYYIF YHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEFPRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIIL LFAGNHIRSKMKENHRTDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20254; Mature: 20254
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGR CEEEEHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCH IFAHTLIFAILLGLAAYYIFYHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC PRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIILLFAGNHIRSKMKENHRTDS CCHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGR CEEEEHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCH IFAHTLIFAILLGLAAYYIFYHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC PRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIILLFAGNHIRSKMKENHRTDS CCHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA