Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227194

Identifier: 21227194

GI number: 21227194

Start: 1284655

End: 1285029

Strand: Direct

Name: 21227194

Synonym: MM_1092

Alternate gene names: NA

Gene position: 1284655-1285029 (Clockwise)

Preceding gene: 21227193

Following gene: 21227195

Centisome position: 31.36

GC content: 44.0

Gene sequence:

>375_bases
ATGTCTGATACCGAAGAGGCCAGAAAGTCAGATGTTAAGGACTCAACAGCAGCCTTTGAAGAAGCCCTTGCCAAAGGAGA
AGATAACAACATATATGTTCTGCGCCTCTATGTCGCAGGGATGGGGCCCAAATCAATACAGGCGATAAACAATATCAAGC
ATATATTTGAAGAGTATGCGCCCGGCAAGTATGAGCTTGAGGTCATTGATATCTATCAGCATCCTGTCTTTGCCAGAGAT
GAGCAGATAGTGGCAGCTCCTACTCTTATAAAAGAGCTCCCTCCACCATTAAGAAAGCTCATAGGCAGCATGTCAGATAC
CGAAAGGGTCCTTATGGGGATGGACCTGAAATCAAAAAAAGATAAAGAATGCTAA

Upstream 100 bases:

>100_bases
TTAGAAGACTCCCTCCACCAATAAAGAAAATTATAGGAGATCTCTCGAATACGGAGCGAGTCCTGGTAGGCCTGGATTTG
CGTCCTGTGGAGTGATGCTA

Downstream 100 bases:

>100_bases
AAATGCAATTTTTGGGGAAGGGCGTTGTAAATATGAGTTCAAAATTGGCGAAAGACCAGGGAAACGTGCCATATCAGAAG
CTGTTAGATAAAAATCATGC

Product: thiol-disulfide isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSDTEEARKSDVKDSTAAFEEALAKGEDNNIYVLRLYVAGMGPKSIQAINNIKHIFEEYAPGKYELEVIDIYQHPVFARD
EQIVAAPTLIKELPPPLRKLIGSMSDTERVLMGMDLKSKKDKEC

Sequences:

>Translated_124_residues
MSDTEEARKSDVKDSTAAFEEALAKGEDNNIYVLRLYVAGMGPKSIQAINNIKHIFEEYAPGKYELEVIDIYQHPVFARD
EQIVAAPTLIKELPPPLRKLIGSMSDTERVLMGMDLKSKKDKEC
>Mature_123_residues
SDTEEARKSDVKDSTAAFEEALAKGEDNNIYVLRLYVAGMGPKSIQAINNIKHIFEEYAPGKYELEVIDIYQHPVFARDE
QIVAAPTLIKELPPPLRKLIGSMSDTERVLMGMDLKSKKDKEC

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kaiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011649
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07689 KaiB [H]

EC number: NA

Molecular weight: Translated: 13958; Mature: 13827

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTEEARKSDVKDSTAAFEEALAKGEDNNIYVLRLYVAGMGPKSIQAINNIKHIFEEYA
CCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHC
PGKYELEVIDIYQHPVFARDEQIVAAPTLIKELPPPLRKLIGSMSDTERVLMGMDLKSKK
CCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCCC
DKEC
CCCC
>Mature Secondary Structure 
SDTEEARKSDVKDSTAAFEEALAKGEDNNIYVLRLYVAGMGPKSIQAINNIKHIFEEYA
CCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHC
PGKYELEVIDIYQHPVFARDEQIVAAPTLIKELPPPLRKLIGSMSDTERVLMGMDLKSKK
CCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCCC
DKEC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]