Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227193

Identifier: 21227193

GI number: 21227193

Start: 1284308

End: 1284649

Strand: Direct

Name: 21227193

Synonym: MM_1091

Alternate gene names: NA

Gene position: 1284308-1284649 (Clockwise)

Preceding gene: 21227192

Following gene: 21227194

Centisome position: 31.35

GC content: 47.66

Gene sequence:

>342_bases
ATGGGAAATGCGGCACAAAGCGAAAACGGGCCCGAGCTTCTCGAGTCTGATACGACGTCTGAGCAGGAATTTTATATCCT
GAGGCTATACGTAGCTGGTCAGACTAAAAAGAGTTTGACAGCCTTCGCCAACTTAAAGAAAATCTGCGAAGAACATCTGG
GCGGCAGGTACAGGATTGAAGTCATCGATCTTCTGGAGAACCCGCAGCTGGCTAAAGGAGATCAAATATTAGCTGTTCCA
ACACTGGTTAGAAGACTCCCTCCACCAATAAAGAAAATTATAGGAGATCTCTCGAATACGGAGCGAGTCCTGGTAGGCCT
GGATTTGCGTCCTGTGGAGTGA

Upstream 100 bases:

>100_bases
TCCAATAGTCTATGTTAAAAATGTATGGGGTTCAAAAAATAAGAGAAGGGGGCTTCCAGGGAAAAATTGCTCCTTCTTAT
GTTCAAATGGTGGAAATTAT

Downstream 100 bases:

>100_bases
TGCTAATGTCTGATACCGAAGAGGCCAGAAAGTCAGATGTTAAGGACTCAACAGCAGCCTTTGAAGAAGCCCTTGCCAAA
GGAGAAGATAACAACATATA

Product: thiol-disulfide isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIEVIDLLENPQLAKGDQILAVP
TLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE

Sequences:

>Translated_113_residues
MGNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIEVIDLLENPQLAKGDQILAVP
TLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE
>Mature_112_residues
GNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIEVIDLLENPQLAKGDQILAVPT
LVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kaiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011649
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07689 KaiB [H]

EC number: NA

Molecular weight: Translated: 12570; Mature: 12438

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIE
CCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEE
VIDLLENPQLAKGDQILAVPTLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE
EEEECCCCCCCCCCEEEEHHHHHHHCCHHHHHHHCCCCCCCEEEEECCEEECC
>Mature Secondary Structure 
GNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIE
CCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEE
VIDLLENPQLAKGDQILAVPTLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE
EEEECCCCCCCCCCEEEEHHHHHHHCCHHHHHHHCCCCCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]