| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227193
Identifier: 21227193
GI number: 21227193
Start: 1284308
End: 1284649
Strand: Direct
Name: 21227193
Synonym: MM_1091
Alternate gene names: NA
Gene position: 1284308-1284649 (Clockwise)
Preceding gene: 21227192
Following gene: 21227194
Centisome position: 31.35
GC content: 47.66
Gene sequence:
>342_bases ATGGGAAATGCGGCACAAAGCGAAAACGGGCCCGAGCTTCTCGAGTCTGATACGACGTCTGAGCAGGAATTTTATATCCT GAGGCTATACGTAGCTGGTCAGACTAAAAAGAGTTTGACAGCCTTCGCCAACTTAAAGAAAATCTGCGAAGAACATCTGG GCGGCAGGTACAGGATTGAAGTCATCGATCTTCTGGAGAACCCGCAGCTGGCTAAAGGAGATCAAATATTAGCTGTTCCA ACACTGGTTAGAAGACTCCCTCCACCAATAAAGAAAATTATAGGAGATCTCTCGAATACGGAGCGAGTCCTGGTAGGCCT GGATTTGCGTCCTGTGGAGTGA
Upstream 100 bases:
>100_bases TCCAATAGTCTATGTTAAAAATGTATGGGGTTCAAAAAATAAGAGAAGGGGGCTTCCAGGGAAAAATTGCTCCTTCTTAT GTTCAAATGGTGGAAATTAT
Downstream 100 bases:
>100_bases TGCTAATGTCTGATACCGAAGAGGCCAGAAAGTCAGATGTTAAGGACTCAACAGCAGCCTTTGAAGAAGCCCTTGCCAAA GGAGAAGATAACAACATATA
Product: thiol-disulfide isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MGNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIEVIDLLENPQLAKGDQILAVP TLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE
Sequences:
>Translated_113_residues MGNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIEVIDLLENPQLAKGDQILAVP TLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE >Mature_112_residues GNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIEVIDLLENPQLAKGDQILAVPT LVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kaiB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011649 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF07689 KaiB [H]
EC number: NA
Molecular weight: Translated: 12570; Mature: 12438
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIE CCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEE VIDLLENPQLAKGDQILAVPTLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE EEEECCCCCCCCCCEEEEHHHHHHHCCHHHHHHHCCCCCCCEEEEECCEEECC >Mature Secondary Structure GNAAQSENGPELLESDTTSEQEFYILRLYVAGQTKKSLTAFANLKKICEEHLGGRYRIE CCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEE VIDLLENPQLAKGDQILAVPTLVRRLPPPIKKIIGDLSNTERVLVGLDLRPVE EEEECCCCCCCCCCEEEEHHHHHHHCCHHHHHHHCCCCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]