Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227187

Identifier: 21227187

GI number: 21227187

Start: 1277375

End: 1278346

Strand: Direct

Name: 21227187

Synonym: MM_1085

Alternate gene names: NA

Gene position: 1277375-1278346 (Clockwise)

Preceding gene: 21227186

Following gene: 21227188

Centisome position: 31.18

GC content: 43.52

Gene sequence:

>972_bases
ATGATGGATCCGCAAATAGAAAGAAAACTCATTGAAATCATGAGGGTGATTCATGAAAGTGACAAGCCCATAGGTGCCCG
GGCTATAGCTGATGAACTGAACAACCGGGGCTATGATATAGGAGAGCGGGCTGTCCGTTACCACCTCAGGATCCTGGATG
AGAGAGGGTTTACACGCAAGCACGGATACGCCGGGCGTACACTTACTGATCTTGGGGAAAACGAAATGAATGACGCCCTC
ATTGGGGACCGTTTCGGTTTTGTAATATCCAGGATAGAAGAAATGGCATTCAGAACCACCTATAACCCTGAAACTGACAA
AGGGGATGTTGTGGTAAATATCTCTTATTTTGACAAAGATGATTTCGAAACTGTTATCGAGTTAATTTCGTATACTGCTC
ACGCAGGCTATATGATAAGCCCGAGAGTAAGAATTTTCGAAGAGGATTCGCTGGAAATGTCTTTGCCTCCGGGGAAAATA
GGAATAGCTACCGTGTGCAGCGTCACTTTTGACGGGCTTCTTCTGAAAGCAGGAATTCCCGTAGAACCTGCTTACGGAGG
GATACTCCAGATAGAAAACAAAAAACCTGCACGTTTCCTTGACCTTATTTCTTACAGCGGGACCTCTATAGACCCAATAA
AGATTTTTATGAATAGGACTCCTACTTCAGTTCTTGAAGTACTTGAGAAAGGGGAAGGAAAAATACTTGCCAATATGCGT
CAGATAAATTCCTCTGCTTACGAGATGACAGGAAAAATTTTGAAAAAAGCAGAAAAAGTGGGTCTTGCAGGCTGTATCAC
TCTGGGAGAAATTGATGAGTATTTACTTGGAGCTCCGGTTGAAACCGGAAAGTTCGGGGCTGCGGTAGTGGGAGGAATTA
ATGGGATCTGCGCACTTGAGGAAACAGGAATTGAAATAGAGACAAACCCAATTTCTACCATGCTGGATTATCAGACAATG
AAAGAGATATAA

Upstream 100 bases:

>100_bases
AGAGTCACCCATAAAAGGTTTATTATGTGGCTTCTGTGGTTTTATCATTATTATCCGTAAACGTTACGGAATTTATACAG
GATATAACGGTGTTATAGAC

Downstream 100 bases:

>100_bases
ATTTAATATAAATCAAATATAAATCTAATACAAATTTAATATAAATCTAATACAAATTTAATATAAATCTAATATAAATT
TAATATAAATCAAATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MMDPQIERKLIEIMRVIHESDKPIGARAIADELNNRGYDIGERAVRYHLRILDERGFTRKHGYAGRTLTDLGENEMNDAL
IGDRFGFVISRIEEMAFRTTYNPETDKGDVVVNISYFDKDDFETVIELISYTAHAGYMISPRVRIFEEDSLEMSLPPGKI
GIATVCSVTFDGLLLKAGIPVEPAYGGILQIENKKPARFLDLISYSGTSIDPIKIFMNRTPTSVLEVLEKGEGKILANMR
QINSSAYEMTGKILKKAEKVGLAGCITLGEIDEYLLGAPVETGKFGAAVVGGINGICALEETGIEIETNPISTMLDYQTM
KEI

Sequences:

>Translated_323_residues
MMDPQIERKLIEIMRVIHESDKPIGARAIADELNNRGYDIGERAVRYHLRILDERGFTRKHGYAGRTLTDLGENEMNDAL
IGDRFGFVISRIEEMAFRTTYNPETDKGDVVVNISYFDKDDFETVIELISYTAHAGYMISPRVRIFEEDSLEMSLPPGKI
GIATVCSVTFDGLLLKAGIPVEPAYGGILQIENKKPARFLDLISYSGTSIDPIKIFMNRTPTSVLEVLEKGEGKILANMR
QINSSAYEMTGKILKKAEKVGLAGCITLGEIDEYLLGAPVETGKFGAAVVGGINGICALEETGIEIETNPISTMLDYQTM
KEI
>Mature_323_residues
MMDPQIERKLIEIMRVIHESDKPIGARAIADELNNRGYDIGERAVRYHLRILDERGFTRKHGYAGRTLTDLGENEMNDAL
IGDRFGFVISRIEEMAFRTTYNPETDKGDVVVNISYFDKDDFETVIELISYTAHAGYMISPRVRIFEEDSLEMSLPPGKI
GIATVCSVTFDGLLLKAGIPVEPAYGGILQIENKKPARFLDLISYSGTSIDPIKIFMNRTPTSVLEVLEKGEGKILANMR
QINSSAYEMTGKILKKAEKVGLAGCITLGEIDEYLLGAPVETGKFGAAVVGGINGICALEETGIEIETNPISTMLDYQTM
KEI

Specific function: Unknown

COG id: COG1693

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002846
- InterPro:   IPR013668
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01995 DUF128; PF08461 HTH_12 [H]

EC number: NA

Molecular weight: Translated: 35771; Mature: 35771

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDPQIERKLIEIMRVIHESDKPIGARAIADELNNRGYDIGERAVRYHLRILDERGFTRK
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
HGYAGRTLTDLGENEMNDALIGDRFGFVISRIEEMAFRTTYNPETDKGDVVVNISYFDKD
CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
DFETVIELISYTAHAGYMISPRVRIFEEDSLEMSLPPGKIGIATVCSVTFDGLLLKAGIP
HHHHHHHHHHHHHCCCEEECCCEEEEECCCCEEECCCCCCHHHHHHHHHHCCEEEECCCC
VEPAYGGILQIENKKPARFLDLISYSGTSIDPIKIFMNRTPTSVLEVLEKGEGKILANMR
CCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEHHHH
QINSSAYEMTGKILKKAEKVGLAGCITLGEIDEYLLGAPVETGKFGAAVVGGINGICALE
HHCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEE
ETGIEIETNPISTMLDYQTMKEI
CCCCEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMDPQIERKLIEIMRVIHESDKPIGARAIADELNNRGYDIGERAVRYHLRILDERGFTRK
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
HGYAGRTLTDLGENEMNDALIGDRFGFVISRIEEMAFRTTYNPETDKGDVVVNISYFDKD
CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
DFETVIELISYTAHAGYMISPRVRIFEEDSLEMSLPPGKIGIATVCSVTFDGLLLKAGIP
HHHHHHHHHHHHHCCCEEECCCEEEEECCCCEEECCCCCCHHHHHHHHHHCCEEEECCCC
VEPAYGGILQIENKKPARFLDLISYSGTSIDPIKIFMNRTPTSVLEVLEKGEGKILANMR
CCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEHHHH
QINSSAYEMTGKILKKAEKVGLAGCITLGEIDEYLLGAPVETGKFGAAVVGGINGICALE
HHCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEE
ETGIEIETNPISTMLDYQTMKEI
CCCCEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]