Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227186

Identifier: 21227186

GI number: 21227186

Start: 1276099

End: 1276596

Strand: Direct

Name: 21227186

Synonym: MM_1084

Alternate gene names: NA

Gene position: 1276099-1276596 (Clockwise)

Preceding gene: 21227185

Following gene: 21227187

Centisome position: 31.15

GC content: 43.17

Gene sequence:

>498_bases
GTGGTTGTCTGCCCTAAATGCAGGCAGCATGCTCAGATAAGCGAAACCGGAAAAAAGACTCTGAGATGCCAGAAATGCGG
AGCACTCCTGCATGCTCGAAAACTTAGAGTGTTCGGTTCTTTTGAGGAATTACCTGAAGCTGTGGACTTCAGGACTCGTC
TGCAAGCTGAGATTTCCGGAAAAGGAAAAGAAACTTTTTCCCTGAAAACCTTTTCAGAAGATTCTGGCAGCTCAGGTTTT
GAAAACGAAGCTGTACAGAAAAAGGCACAACCTCTGGCATCAGGAGCTGCTCCCGGAAATATATCAGTTAAAAGAGACCA
GAAGTCAATCATGAGTGAGATCCTTAAATCTTCATGTGGGAAGATGAAGATAGAAGAGTTTCGTGAGGAAGCTCTGGAAA
AAGGGATAAGTAAGGAAAGGTTTGAGATAATCCTGAAAAAACTTCTGGAAACAGGAGAGCTTTATTCTCCGGAACCAGGG
GTTGTAAAACTCATATAA

Upstream 100 bases:

>100_bases
AAATAGATCTCCTGAGAGTAATCAGGGACTTTCAGAAAAGACAGAGAAGGTACGGGAAATAAAGATGGAGTTTGGGGAAA
GGACAGGAAGTCATTATGTT

Downstream 100 bases:

>100_bases
CTATGAACATAATCTGATATACTGCTGATAGATGTTGAGATTTCATTACCGTACCTGATTATAGATAGTTCCTGCAGAGA
ACCACTGTAGATTATTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MVVCPKCRQHAQISETGKKTLRCQKCGALLHARKLRVFGSFEELPEAVDFRTRLQAEISGKGKETFSLKTFSEDSGSSGF
ENEAVQKKAQPLASGAAPGNISVKRDQKSIMSEILKSSCGKMKIEEFREEALEKGISKERFEIILKKLLETGELYSPEPG
VVKLI

Sequences:

>Translated_165_residues
MVVCPKCRQHAQISETGKKTLRCQKCGALLHARKLRVFGSFEELPEAVDFRTRLQAEISGKGKETFSLKTFSEDSGSSGF
ENEAVQKKAQPLASGAAPGNISVKRDQKSIMSEILKSSCGKMKIEEFREEALEKGISKERFEIILKKLLETGELYSPEPG
VVKLI
>Mature_165_residues
MVVCPKCRQHAQISETGKKTLRCQKCGALLHARKLRVFGSFEELPEAVDFRTRLQAEISGKGKETFSLKTFSEDSGSSGF
ENEAVQKKAQPLASGAAPGNISVKRDQKSIMSEILKSSCGKMKIEEFREEALEKGISKERFEIILKKLLETGELYSPEPG
VVKLI

Specific function: Unknown

COG id: COG1241

COG function: function code L; Predicted ATPase involved in replication control, Cdc46/Mcm family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18292; Mature: 18292

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVCPKCRQHAQISETGKKTLRCQKCGALLHARKLRVFGSFEELPEAVDFRTRLQAEISG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
KGKETFSLKTFSEDSGSSGFENEAVQKKAQPLASGAAPGNISVKRDQKSIMSEILKSSCG
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHCC
KMKIEEFREEALEKGISKERFEIILKKLLETGELYSPEPGVVKLI
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEC
>Mature Secondary Structure
MVVCPKCRQHAQISETGKKTLRCQKCGALLHARKLRVFGSFEELPEAVDFRTRLQAEISG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
KGKETFSLKTFSEDSGSSGFENEAVQKKAQPLASGAAPGNISVKRDQKSIMSEILKSSCG
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHCC
KMKIEEFREEALEKGISKERFEIILKKLLETGELYSPEPGVVKLI
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA