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The map label for this gene is ybiR [C]

Identifier: 21227151

GI number: 21227151

Start: 1228207

End: 1229469

Strand: Reverse

Name: ybiR [C]

Synonym: MM_1049

Alternate gene names: 21227151

Gene position: 1229469-1228207 (Counterclockwise)

Preceding gene: 21227153

Following gene: 21227150

Centisome position: 30.01

GC content: 46.16

Gene sequence:

>1263_bases
ATGGTAGCTGACTCTTTTGTATATTCTTTTGTATCTTCGCCCGACCTTTCTGTACTCGTCCTTCTCTGTGTCCTTCTGCT
TACCGCTCTCAGGCAGGTCGGGTCTTTAAGGTTGCAGATCTGGCAGGTCATGACCCTTGGAGCCTTTTCTGTGCTGCTTC
TCGGGGAAATTTCACCTCAGGAAGCTCTCAGGGCAATAAACATAGATGTGCTCCTTTTTCTTTTCGGGGCCTTTTGTGTG
GGGGAAGCACTTAACAGGAGCGGATATCTTGCCTGGATAGGAGGCCGGATTGTTTCAAGGGCAAAAAATACGGACCAGCT
CGTTTTACTGGTAATCTTCTCCACAGGTCTTCTCTCCGCAGTCCTTATGAATGACACCCTTGCTATAATGGGTACCCCGC
TGGTTTTGCGTTTTTCAAGGAAATACGGCGTGTCTCCCAAACTCATGCTCTTTGCCCTGGCTTTCGGGATAACCACCGGG
AGCGTCATGAGCCCTATAGGAAACCCCCAGAACCTCCTGATCGCAATTGACGGAAATCTTGACTCCCCCTTTGTGGTATT
TTTAAGCTCCCTGGCCGTACCTACTATGATAAATCTTGTGCTTGTTTATGCCGTTCTTAAACTCTTTTTCAGCAGGGAAT
TTGGGAAACCAGCTCTGATACACACCGAAGAGCTTATTTCAGATCCCGAACTTGCGGAAATATCAAAAAAGGCTCTTTTC
CTTCTGCTGGCTCTTATTACATGTAAAATTCTTCTCGTAGAGTTCTTGCCTGCCTGGGATTTCAGTTTGAGCTGGATTGC
CCTTTTCTCGGCTTCTCCCATACTGCTCAGCAAAAGGCGGACTGAAGTTGTAAAAAATATTGACTGGGCAACCCTGGTCT
TCTTTGTTTCCATGTTCGTGCTCATGGAAAGCGTCTGGATTTCCGGAACCTGTCAGGGACTCCTGTACAGAATGTCTCCG
CAGTTAGGCTCAGTTCCCACTATCCTTGCACTCAGCATAGGACTCAGCCAGCTTATTTCTAATGTTCCCTTTGTTGCGCT
CTACCTCCCTGCAATGGGGAGCGGTGTTTCACAGGGGCAGTTGATGGCGCTCGCTGCCGGAAGTACAATTGCAGGGAATC
TTTTGATTCTTGGGGCTGCAAGCAACGTTATTATACTCCAGAATGCCGAAAAAGAAGGTGAAACTTTCTCTTTTATGGAA
TTCGCTAAAATAGGGCTTTTAATTTCATTTTTAAATGCTATTATTTACTTTATATTTCTTTAA

Upstream 100 bases:

>100_bases
CTCCTCTACAAGCGCAGGGATTTTATACTTGTACATATATCACTCCCAAAGTTTATGTTAATAGAACTCTGGAATGTATG
TTAACAGGCTTGCGGGATTT

Downstream 100 bases:

>100_bases
ACTTTAAAAGCAATTATATTTACTTAAATGAAGCAAGGAAATTCGTTTTAACTTGAAATGCTGTTTTAATACCTATTAAT
CCTTTAACTGCTCTATCCAG

Product: arsenite permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MVADSFVYSFVSSPDLSVLVLLCVLLLTALRQVGSLRLQIWQVMTLGAFSVLLLGEISPQEALRAINIDVLLFLFGAFCV
GEALNRSGYLAWIGGRIVSRAKNTDQLVLLVIFSTGLLSAVLMNDTLAIMGTPLVLRFSRKYGVSPKLMLFALAFGITTG
SVMSPIGNPQNLLIAIDGNLDSPFVVFLSSLAVPTMINLVLVYAVLKLFFSREFGKPALIHTEELISDPELAEISKKALF
LLLALITCKILLVEFLPAWDFSLSWIALFSASPILLSKRRTEVVKNIDWATLVFFVSMFVLMESVWISGTCQGLLYRMSP
QLGSVPTILALSIGLSQLISNVPFVALYLPAMGSGVSQGQLMALAAGSTIAGNLLILGAASNVIILQNAEKEGETFSFME
FAKIGLLISFLNAIIYFIFL

Sequences:

>Translated_420_residues
MVADSFVYSFVSSPDLSVLVLLCVLLLTALRQVGSLRLQIWQVMTLGAFSVLLLGEISPQEALRAINIDVLLFLFGAFCV
GEALNRSGYLAWIGGRIVSRAKNTDQLVLLVIFSTGLLSAVLMNDTLAIMGTPLVLRFSRKYGVSPKLMLFALAFGITTG
SVMSPIGNPQNLLIAIDGNLDSPFVVFLSSLAVPTMINLVLVYAVLKLFFSREFGKPALIHTEELISDPELAEISKKALF
LLLALITCKILLVEFLPAWDFSLSWIALFSASPILLSKRRTEVVKNIDWATLVFFVSMFVLMESVWISGTCQGLLYRMSP
QLGSVPTILALSIGLSQLISNVPFVALYLPAMGSGVSQGQLMALAAGSTIAGNLLILGAASNVIILQNAEKEGETFSFME
FAKIGLLISFLNAIIYFIFL
>Mature_420_residues
MVADSFVYSFVSSPDLSVLVLLCVLLLTALRQVGSLRLQIWQVMTLGAFSVLLLGEISPQEALRAINIDVLLFLFGAFCV
GEALNRSGYLAWIGGRIVSRAKNTDQLVLLVIFSTGLLSAVLMNDTLAIMGTPLVLRFSRKYGVSPKLMLFALAFGITTG
SVMSPIGNPQNLLIAIDGNLDSPFVVFLSSLAVPTMINLVLVYAVLKLFFSREFGKPALIHTEELISDPELAEISKKALF
LLLALITCKILLVEFLPAWDFSLSWIALFSASPILLSKRRTEVVKNIDWATLVFFVSMFVLMESVWISGTCQGLLYRMSP
QLGSVPTILALSIGLSQLISNVPFVALYLPAMGSGVSQGQLMALAAGSTIAGNLLILGAASNVIILQNAEKEGETFSFME
FAKIGLLISFLNAIIYFIFL

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Homo sapiens, GI157266326, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1787039, Length=346, Percent_Identity=27.1676300578035, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 45565; Mature: 45565

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVADSFVYSFVSSPDLSVLVLLCVLLLTALRQVGSLRLQIWQVMTLGAFSVLLLGEISPQ
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EALRAINIDVLLFLFGAFCVGEALNRSGYLAWIGGRIVSRAKNTDQLVLLVIFSTGLLSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCCCEEEHHHHHHHHHHH
VLMNDTLAIMGTPLVLRFSRKYGVSPKLMLFALAFGITTGSVMSPIGNPQNLLIAIDGNL
HHHCCCHHHHCCCHHEEEHHHCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCC
DSPFVVFLSSLAVPTMINLVLVYAVLKLFFSREFGKPALIHTEELISDPELAEISKKALF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHH
LLLALITCKILLVEFLPAWDFSLSWIALFSASPILLSKRRTEVVKNIDWATLVFFVSMFV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMESVWISGTCQGLLYRMSPQLGSVPTILALSIGLSQLISNVPFVALYLPAMGSGVSQGQ
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCC
LMALAAGSTIAGNLLILGAASNVIILQNAEKEGETFSFMEFAKIGLLISFLNAIIYFIFL
EEEEECCCCEECCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVADSFVYSFVSSPDLSVLVLLCVLLLTALRQVGSLRLQIWQVMTLGAFSVLLLGEISPQ
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EALRAINIDVLLFLFGAFCVGEALNRSGYLAWIGGRIVSRAKNTDQLVLLVIFSTGLLSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCCCEEEHHHHHHHHHHH
VLMNDTLAIMGTPLVLRFSRKYGVSPKLMLFALAFGITTGSVMSPIGNPQNLLIAIDGNL
HHHCCCHHHHCCCHHEEEHHHCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCC
DSPFVVFLSSLAVPTMINLVLVYAVLKLFFSREFGKPALIHTEELISDPELAEISKKALF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHH
LLLALITCKILLVEFLPAWDFSLSWIALFSASPILLSKRRTEVVKNIDWATLVFFVSMFV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMESVWISGTCQGLLYRMSPQLGSVPTILALSIGLSQLISNVPFVALYLPAMGSGVSQGQ
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCC
LMALAAGSTIAGNLLILGAASNVIILQNAEKEGETFSFMEFAKIGLLISFLNAIIYFIFL
EEEEECCCCEECCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]