| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227144
Identifier: 21227144
GI number: 21227144
Start: 1218324
End: 1218830
Strand: Direct
Name: 21227144
Synonym: MM_1042
Alternate gene names: NA
Gene position: 1218324-1218830 (Clockwise)
Preceding gene: 21227143
Following gene: 21227145
Centisome position: 29.74
GC content: 43.59
Gene sequence:
>507_bases ATGCAGGAAAATTCAGAATTCCAGGAAAAAAAGGAACCTGAAGAAAGCGATTTCAAATCTCCGGGGGAACTTGAAACTGG TTACACAGAAAAATCCTGGAAAAAGCCTGAGAAAACAATGGAAGAAAAAGGCACGACTATGGATTCGGAATACCAGGAAA GAGAAGAACCAGCTTCAAGCGGATTCAAAGCTCCGGGAGAACATGAAGCAGGATATACAGAGAGATCATGGAAAAAACCC GAAGGAACTATGGAAGAAGATATAGGATCTGGAGGGGAAACCCGAGAAGAGGAAAGCACAGGCTATACAAAGAAGCGCCT GACAAGAAGCAAAAGTGACCGCATGGTTTTTGGAGTCTGCGGAGGGCTCGGAAAATACTTCGGTGTTGACCCAACCCTTA TTAGGCTTGGCTTTGCTTTCTTTATCCTGTTGAGCGGAATCGGGCCCGGAATCGTGATATACATTATTATGGCAATAATC ATGCCTCAGGAAAATAATGTTAAATGA
Upstream 100 bases:
>100_bases GTCACTGAAAAAAGAAGCAGAGCAGCAATAACTTAGCAAGGACAGTTAAAGAATTAATAAGTACCAGATAATATAAATCC TCCTAAATAGAATAAACAAT
Downstream 100 bases:
>100_bases TGTCTGAAATCCTTAAAGCAATAAAGATTAAAGGCAATTAAAGAAAAAAATCGCCTGCAAACAAAGAGAATAACAGGGAG AGATTATACAGGGACAGGGA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQENSEFQEKKEPEESDFKSPGELETGYTEKSWKKPEKTMEEKGTTMDSEYQEREEPASSGFKAPGEHEAGYTERSWKKP EGTMEEDIGSGGETREEESTGYTKKRLTRSKSDRMVFGVCGGLGKYFGVDPTLIRLGFAFFILLSGIGPGIVIYIIMAII MPQENNVK
Sequences:
>Translated_168_residues MQENSEFQEKKEPEESDFKSPGELETGYTEKSWKKPEKTMEEKGTTMDSEYQEREEPASSGFKAPGEHEAGYTERSWKKP EGTMEEDIGSGGETREEESTGYTKKRLTRSKSDRMVFGVCGGLGKYFGVDPTLIRLGFAFFILLSGIGPGIVIYIIMAII MPQENNVK >Mature_168_residues MQENSEFQEKKEPEESDFKSPGELETGYTEKSWKKPEKTMEEKGTTMDSEYQEREEPASSGFKAPGEHEAGYTERSWKKP EGTMEEDIGSGGETREEESTGYTKKRLTRSKSDRMVFGVCGGLGKYFGVDPTLIRLGFAFFILLSGIGPGIVIYIIMAII MPQENNVK
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18901; Mature: 18901
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENSEFQEKKEPEESDFKSPGELETGYTEKSWKKPEKTMEEKGTTMDSEYQEREEPASS CCCCCHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHC GFKAPGEHEAGYTERSWKKPEGTMEEDIGSGGETREEESTGYTKKRLTRSKSDRMVFGVC CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEHH GGLGKYFGVDPTLIRLGFAFFILLSGIGPGIVIYIIMAIIMPQENNVK HHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQENSEFQEKKEPEESDFKSPGELETGYTEKSWKKPEKTMEEKGTTMDSEYQEREEPASS CCCCCHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHC GFKAPGEHEAGYTERSWKKPEGTMEEDIGSGGETREEESTGYTKKRLTRSKSDRMVFGVC CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEHH GGLGKYFGVDPTLIRLGFAFFILLSGIGPGIVIYIIMAIIMPQENNVK HHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA