| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227131
Identifier: 21227131
GI number: 21227131
Start: 1201175
End: 1202290
Strand: Reverse
Name: 21227131
Synonym: MM_1029
Alternate gene names: NA
Gene position: 1202290-1201175 (Counterclockwise)
Preceding gene: 21227132
Following gene: 21227130
Centisome position: 29.35
GC content: 44.89
Gene sequence:
>1116_bases ATGAGTGAGCTTGAAATTATCGAAGCGGCTCTTTTTGCTGCAGGCAGGGCAGTAAGCCTTGAAAAACTTATGAAAATTAC CGGGAAGCCGAAAAAAAATGTCTCTTCGGCAGTTCAGGAGCTGATGGGTGCTTATTCTTCCCGGATGTCGGGTCTTGAAA TCCTTGATCTTGGAGACCGCTATGTCATGCAGGTGAAGCCTGAGTATTCCGAACTCATGCGTGAGGTTGCCCCAAAAGAA CTCTCAGCTCCCAAACTCCGGACTCTGTCCATGATTGCTTATCATCAGCCCCTTCTCCAGTCCGACCTCATTGAAATGAG AGGCAGTGGAGCTTATGACCACATAAAAGACCTTATTGAAAGGGGTTTTGTCGAGTCTGTTCCCTGTGGAAGGAGCAGGC AGCTTTCCACCACCCCTCTGTTTGCAGATTATTTCGGGCTCAAAAAGAACGATCCCAAAGCTATAAAAGAGAAAATTATC GAGTTATTGAGGGCTCAGGGCGGTCAGAGTGAGATCAACCTCTGGGTCGGGAAAAAGACCATTGCAGTGACTCCTATGTA CGAGTCCCTTATGAAGATGTGCGGGATTAAAGATTATTTTGTTGTGAATGCTTACTGCCCTTCCAAAGAGGAAATTTCTC GCCTGCTTGAAGCTGATGTTCTTATAGTTACTGCCGGTTACCTCGATACGGTAAAACAACACTGCGATGGTGAGATCCTT GAGGTCCGCTCGACAACCTTTGGAGACCTTATTGAGGCAATCTCCTTAATCTCTGAAGAACTTTCCGATGAAGTAGACCC TGAATCTGTGGAAAACACTCTCCGGAAAATCAGGGAGACAAGAGAAAAATATGTAGCTTCAGCCATGCTCATTGAGAAGA AAGTAAAACCTGCAACTGATATGGTCTCAAAGATCGTAAATGATCTAAATATAAGGATTTCTACGGAAGGCATCCTTATA GCTCCTGATTACGGGACTTCGGGCGAGGGAGTAAGTATCGGAAAAGGGGCTAAAATTCTGGTCCCCACCCATCGCAGTGT AGAGGGAGATCTTCTTGAGAGGGTATATCAAAAATATGACTCTATCATTGAAGGTTTAAAAAATTTTAAGGACTGA
Upstream 100 bases:
>100_bases TCCTTTCCTGTGAACCGGAATATATAAATCCTGACTCTTCTGAAGAAGCACATTAATTCCCTGAAAAATAACTTTACTCT CTTTTCTGGTCGTGAAATTT
Downstream 100 bases:
>100_bases TCTCTTATAAAGCCAGGTCGGAGGCCGTTTTCTTCTTTAATTTTTTTTATTTTACTGGCGCCTCTAATTTAAGCTTTTCT GTCGTATTTATATTCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSELEIIEAALFAAGRAVSLEKLMKITGKPKKNVSSAVQELMGAYSSRMSGLEILDLGDRYVMQVKPEYSELMREVAPKE LSAPKLRTLSMIAYHQPLLQSDLIEMRGSGAYDHIKDLIERGFVESVPCGRSRQLSTTPLFADYFGLKKNDPKAIKEKII ELLRAQGGQSEINLWVGKKTIAVTPMYESLMKMCGIKDYFVVNAYCPSKEEISRLLEADVLIVTAGYLDTVKQHCDGEIL EVRSTTFGDLIEAISLISEELSDEVDPESVENTLRKIRETREKYVASAMLIEKKVKPATDMVSKIVNDLNIRISTEGILI APDYGTSGEGVSIGKGAKILVPTHRSVEGDLLERVYQKYDSIIEGLKNFKD
Sequences:
>Translated_371_residues MSELEIIEAALFAAGRAVSLEKLMKITGKPKKNVSSAVQELMGAYSSRMSGLEILDLGDRYVMQVKPEYSELMREVAPKE LSAPKLRTLSMIAYHQPLLQSDLIEMRGSGAYDHIKDLIERGFVESVPCGRSRQLSTTPLFADYFGLKKNDPKAIKEKII ELLRAQGGQSEINLWVGKKTIAVTPMYESLMKMCGIKDYFVVNAYCPSKEEISRLLEADVLIVTAGYLDTVKQHCDGEIL EVRSTTFGDLIEAISLISEELSDEVDPESVENTLRKIRETREKYVASAMLIEKKVKPATDMVSKIVNDLNIRISTEGILI APDYGTSGEGVSIGKGAKILVPTHRSVEGDLLERVYQKYDSIIEGLKNFKD >Mature_370_residues SELEIIEAALFAAGRAVSLEKLMKITGKPKKNVSSAVQELMGAYSSRMSGLEILDLGDRYVMQVKPEYSELMREVAPKEL SAPKLRTLSMIAYHQPLLQSDLIEMRGSGAYDHIKDLIERGFVESVPCGRSRQLSTTPLFADYFGLKKNDPKAIKEKIIE LLRAQGGQSEINLWVGKKTIAVTPMYESLMKMCGIKDYFVVNAYCPSKEEISRLLEADVLIVTAGYLDTVKQHCDGEILE VRSTTFGDLIEAISLISEELSDEVDPESVENTLRKIRETREKYVASAMLIEKKVKPATDMVSKIVNDLNIRISTEGILIA PDYGTSGEGVSIGKGAKILVPTHRSVEGDLLERVYQKYDSIIEGLKNFKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41294; Mature: 41163
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELEIIEAALFAAGRAVSLEKLMKITGKPKKNVSSAVQELMGAYSSRMSGLEILDLGDR CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC YVMQVKPEYSELMREVAPKELSAPKLRTLSMIAYHQPLLQSDLIEMRGSGAYDHIKDLIE EEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGFVESVPCGRSRQLSTTPLFADYFGLKKNDPKAIKEKIIELLRAQGGQSEINLWVGKKT CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCEE IAVTPMYESLMKMCGIKDYFVVNAYCPSKEEISRLLEADVLIVTAGYLDTVKQHCDGEIL EEECHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCEEEEECHHHHHHHHHCCCCEE EVRSTTFGDLIEAISLISEELSDEVDPESVENTLRKIRETREKYVASAMLIEKKVKPATD EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MVSKIVNDLNIRISTEGILIAPDYGTSGEGVSIGKGAKILVPTHRSVEGDLLERVYQKYD HHHHHHHHCEEEEECCEEEEECCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHH SIIEGLKNFKD HHHHHHHHCCC >Mature Secondary Structure SELEIIEAALFAAGRAVSLEKLMKITGKPKKNVSSAVQELMGAYSSRMSGLEILDLGDR CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC YVMQVKPEYSELMREVAPKELSAPKLRTLSMIAYHQPLLQSDLIEMRGSGAYDHIKDLIE EEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGFVESVPCGRSRQLSTTPLFADYFGLKKNDPKAIKEKIIELLRAQGGQSEINLWVGKKT CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCEE IAVTPMYESLMKMCGIKDYFVVNAYCPSKEEISRLLEADVLIVTAGYLDTVKQHCDGEIL EEECHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCEEEEECHHHHHHHHHCCCCEE EVRSTTFGDLIEAISLISEELSDEVDPESVENTLRKIRETREKYVASAMLIEKKVKPATD EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MVSKIVNDLNIRISTEGILIAPDYGTSGEGVSIGKGAKILVPTHRSVEGDLLERVYQKYD HHHHHHHHCEEEEECCEEEEECCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHH SIIEGLKNFKD HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]