Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227120

Identifier: 21227120

GI number: 21227120

Start: 1191574

End: 1192080

Strand: Direct

Name: 21227120

Synonym: MM_1018

Alternate gene names: NA

Gene position: 1191574-1192080 (Clockwise)

Preceding gene: 21227118

Following gene: 21227123

Centisome position: 29.09

GC content: 40.24

Gene sequence:

>507_bases
ATGAAGTATACAAAAATAATACTCATACTGATTTTCATCAGTCTTTCTATTCTCGCATCCGGGTGCGGGGAAAAAATGAA
CAACGAAAAAACAGGAGAGTCTTTAAAGGAACCTTACACAGAATTTTATATCCTGGGGCCTGAAGGAAAAGCCGACAACT
ATCCAGTAGATTACGTTCTTGGAGGGAATGGAACCGTAATAGTTGGAATTGTAAACCATGAGCAGAAACCTGTCAATTAT
ACAATGGAGGTTAAGCTTGAAAACACGCCTCTGCCTTTACCTCCTGATAAGCAGTATATAAGTCTCAGGGACAACGCAAC
ATGGGAAAAAGCAGTTACCATAACCCCACCATTTGAAGGAACGAATATGATGCTTGGATTTTCGCTCTACAAGGAAGGCG
AGAAAAACATAGTTGAAGGAGATCTCTGCACGCCTTATAGAGGCGTCTACCTGGGGATAAATGTATATCAGAATATCTCG
GAGAATAATTCGATAACAGCGATATAA

Upstream 100 bases:

>100_bases
TATTTCAGGCTATGTTGAATTGAAAAATAATAATAAGATGTGAGGAGATACAGTCAAACATTGAAAAATATAGAAGGAAA
ATAGAAGAAGTGTGGAGAAA

Downstream 100 bases:

>100_bases
GCAATCTACTTGAAGGAAATTTAACATTGGACCCTAACATCTCGAAAAAACGAAATAATTAAAATCGCTAAATTCGCAGA
AAAAAAAAGAATTTAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVLGGNGTVIVGIVNHEQKPVNY
TMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEGTNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNIS
ENNSITAI

Sequences:

>Translated_168_residues
MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVLGGNGTVIVGIVNHEQKPVNY
TMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEGTNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNIS
ENNSITAI
>Mature_168_residues
MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVLGGNGTVIVGIVNHEQKPVNY
TMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEGTNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNIS
ENNSITAI

Specific function: Unknown

COG id: COG4743

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18720; Mature: 18720

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCEEEEE
GGNGTVIVGIVNHEQKPVNYTMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEG
CCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC
TNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNISENNSITAI
CCEEEEEEEECCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCEEEC
>Mature Secondary Structure
MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCEEEEE
GGNGTVIVGIVNHEQKPVNYTMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEG
CCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC
TNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNISENNSITAI
CCEEEEEEEECCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA