| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227120
Identifier: 21227120
GI number: 21227120
Start: 1191574
End: 1192080
Strand: Direct
Name: 21227120
Synonym: MM_1018
Alternate gene names: NA
Gene position: 1191574-1192080 (Clockwise)
Preceding gene: 21227118
Following gene: 21227123
Centisome position: 29.09
GC content: 40.24
Gene sequence:
>507_bases ATGAAGTATACAAAAATAATACTCATACTGATTTTCATCAGTCTTTCTATTCTCGCATCCGGGTGCGGGGAAAAAATGAA CAACGAAAAAACAGGAGAGTCTTTAAAGGAACCTTACACAGAATTTTATATCCTGGGGCCTGAAGGAAAAGCCGACAACT ATCCAGTAGATTACGTTCTTGGAGGGAATGGAACCGTAATAGTTGGAATTGTAAACCATGAGCAGAAACCTGTCAATTAT ACAATGGAGGTTAAGCTTGAAAACACGCCTCTGCCTTTACCTCCTGATAAGCAGTATATAAGTCTCAGGGACAACGCAAC ATGGGAAAAAGCAGTTACCATAACCCCACCATTTGAAGGAACGAATATGATGCTTGGATTTTCGCTCTACAAGGAAGGCG AGAAAAACATAGTTGAAGGAGATCTCTGCACGCCTTATAGAGGCGTCTACCTGGGGATAAATGTATATCAGAATATCTCG GAGAATAATTCGATAACAGCGATATAA
Upstream 100 bases:
>100_bases TATTTCAGGCTATGTTGAATTGAAAAATAATAATAAGATGTGAGGAGATACAGTCAAACATTGAAAAATATAGAAGGAAA ATAGAAGAAGTGTGGAGAAA
Downstream 100 bases:
>100_bases GCAATCTACTTGAAGGAAATTTAACATTGGACCCTAACATCTCGAAAAAACGAAATAATTAAAATCGCTAAATTCGCAGA AAAAAAAAGAATTTAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVLGGNGTVIVGIVNHEQKPVNY TMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEGTNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNIS ENNSITAI
Sequences:
>Translated_168_residues MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVLGGNGTVIVGIVNHEQKPVNY TMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEGTNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNIS ENNSITAI >Mature_168_residues MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVLGGNGTVIVGIVNHEQKPVNY TMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEGTNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNIS ENNSITAI
Specific function: Unknown
COG id: COG4743
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18720; Mature: 18720
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCEEEEE GGNGTVIVGIVNHEQKPVNYTMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEG CCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC TNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNISENNSITAI CCEEEEEEEECCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCEEEC >Mature Secondary Structure MKYTKIILILIFISLSILASGCGEKMNNEKTGESLKEPYTEFYILGPEGKADNYPVDYVL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCEEEEE GGNGTVIVGIVNHEQKPVNYTMEVKLENTPLPLPPDKQYISLRDNATWEKAVTITPPFEG CCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC TNMMLGFSLYKEGEKNIVEGDLCTPYRGVYLGINVYQNISENNSITAI CCEEEEEEEECCCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA