Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227123

Identifier: 21227123

GI number: 21227123

Start: 1193677

End: 1194201

Strand: Direct

Name: 21227123

Synonym: MM_1021

Alternate gene names: NA

Gene position: 1193677-1194201 (Clockwise)

Preceding gene: 21227120

Following gene: 21227124

Centisome position: 29.14

GC content: 32.57

Gene sequence:

>525_bases
GTGATAATACATTTCTATTTTCTCCTCTCGATTACAGATAATTCTATGATTAATAGTAGAACAAATTCTATGGCTAATGG
TAGAAATGTTTATTCACTAACCTGCCCCTTACGAGGCACTAAAGAAATTTTTGCTCAGGGATTTCGACGTAGGACAGATA
CGACAAAAAAGAGCAACACTGGATATTATTCATTACAACACTCGGACTTATTTTTTGAAGGGAAAGCCCTCGAAAGGAAA
TTTGAGGTTATGTGCAGGAAATCGGACATGTACAGAACTCTTACAAAAATTCCAAATAGATTCATGAAAACAAACATGGA
CATTCCTGATTCCGAGCTACACAAGCTGCAGGATTCTTATCGAATTTATATTGTCGAAGGTCCACAGCAGTTTTCTGGAA
CCTTTCTAAAGAAGCATAATTTCTATATTATTTTTAAGTTGCTTTCTCTTAGATATAGATCTCATTCTGTTCCCATATTT
AATAATATATTATCTGACTATATTATTTATTTTTATACTATTTAA

Upstream 100 bases:

>100_bases
TGGGGATTTTAGCTTTTCTTTCGTCTTTCAAGAAAATAAGATGTTTCAGCCCTTTTTCATCTCCTGCGAGAAGAATTGGG
TAGATAGGGGATTTGATTAT

Downstream 100 bases:

>100_bases
CAGATATTCATATCCGAAAACAGATTTTAACGTTATTCCATATATCTTTTATGGCCGGGTCATCAAACAATTCTGAAAAA
AGCTCCAAAATTCTTACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNTGYYSLQHSDLFFEGKALERK
FEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSYRIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIF
NNILSDYIIYFYTI

Sequences:

>Translated_174_residues
MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNTGYYSLQHSDLFFEGKALERK
FEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSYRIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIF
NNILSDYIIYFYTI
>Mature_174_residues
MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNTGYYSLQHSDLFFEGKALERK
FEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSYRIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIF
NNILSDYIIYFYTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20717; Mature: 20717

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNT
CEEEEEEEEEECCCCHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
GYYSLQHSDLFFEGKALERKFEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSY
CEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCE
RIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIFNNILSDYIIYFYTI
EEEEEECCCCCCCEEECCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNT
CEEEEEEEEEECCCCHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
GYYSLQHSDLFFEGKALERKFEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSY
CEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCE
RIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIFNNILSDYIIYFYTI
EEEEEECCCCCCCEEECCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA