Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227119

Identifier: 21227119

GI number: 21227119

Start: 1190663

End: 1191451

Strand: Reverse

Name: 21227119

Synonym: MM_1017

Alternate gene names: NA

Gene position: 1191451-1190663 (Counterclockwise)

Preceding gene: 21227121

Following gene: 21227107

Centisome position: 29.09

GC content: 47.28

Gene sequence:

>789_bases
ATGTCTATAATTTCCCTTACCACCGATTTTGGAGGCCTCTACCCCGCAGCCATGAAAGCCGTCATTCTTGGAATTAACCC
CGAAGCGCAGATCGTTGATGTAACCCATTCTATCCGGCAGGCAAGTATCAGAGAGGGCGCCTTTGCACTGTACTCGCTTG
TCCCTTATTTCCCGGCTAAAAGCGTGCACGTGGGAGTTGTCGACCCCGGAGTGGGGACTTCCCGCCGTGCCCTTGCCCTG
AAAGCAGGTCCGGAAGGTGAAGAACAGTTTTTTGTTGGTCCTGATAACGGGCTTATGATCCCTGCAGCCCGCCGCCTTGG
AGATATGGAAGTTTATGAGATCACAAACAGGGAAATAATGCTTAATTCGGAAATTTCTGCAACTTTTCACGGCAGGGACA
TTTTTGCACCTGTAGGGGCCAGACTCTCTAAAGGTATGCCAATCGAGACTGTTGGGAATAGAGTTTCGGATTTTGTAAAC
CTGGATTTCGAAAATTATGGGGTTGATGGGCAATTTCTTGTAGGGGAAGTCGTTTATACTGATAATTTCGGGAATGTGAT
TACAAATATCCCTGAGGATGCGGTCCTGAAGTTCCGTACTTTCGGCTCACAGGTGGAAGTTAACGGCAGAAAAGTCTTTT
TTGTTCAGACCTATGGTTTTGTAGGGCAGGGAGATGCGCTTATTCTTATTGGCAGTCATGGCTTTCTGGAAATTGCAATT
AACAAAGGTAATGCGGCTCTGCAGTTCGGACTCAGAAGTGGAGATACTGTGACAATAAAGGTCCTTTGA

Upstream 100 bases:

>100_bases
TCCTTCTATATTTTTCAATGTTTGACTGTATCTCCTCACATCTTATTATTATTTTTCAATTCAACATAGCCTGAAATAGC
AAAAAAGCCGAATAATATGT

Downstream 100 bases:

>100_bases
AAAAAAGCCGTCATTTATGCGGGTTAAGGGCATAGAAAAGCGGAGAGTAAGGGAAATACCTTATCCTTCGTTTTTTAATG
TGCTAATCCGTGATACTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSIISLTTDFGGLYPAAMKAVILGINPEAQIVDVTHSIRQASIREGAFALYSLVPYFPAKSVHVGVVDPGVGTSRRALAL
KAGPEGEEQFFVGPDNGLMIPAARRLGDMEVYEITNREIMLNSEISATFHGRDIFAPVGARLSKGMPIETVGNRVSDFVN
LDFENYGVDGQFLVGEVVYTDNFGNVITNIPEDAVLKFRTFGSQVEVNGRKVFFVQTYGFVGQGDALILIGSHGFLEIAI
NKGNAALQFGLRSGDTVTIKVL

Sequences:

>Translated_262_residues
MSIISLTTDFGGLYPAAMKAVILGINPEAQIVDVTHSIRQASIREGAFALYSLVPYFPAKSVHVGVVDPGVGTSRRALAL
KAGPEGEEQFFVGPDNGLMIPAARRLGDMEVYEITNREIMLNSEISATFHGRDIFAPVGARLSKGMPIETVGNRVSDFVN
LDFENYGVDGQFLVGEVVYTDNFGNVITNIPEDAVLKFRTFGSQVEVNGRKVFFVQTYGFVGQGDALILIGSHGFLEIAI
NKGNAALQFGLRSGDTVTIKVL
>Mature_261_residues
SIISLTTDFGGLYPAAMKAVILGINPEAQIVDVTHSIRQASIREGAFALYSLVPYFPAKSVHVGVVDPGVGTSRRALALK
AGPEGEEQFFVGPDNGLMIPAARRLGDMEVYEITNREIMLNSEISATFHGRDIFAPVGARLSKGMPIETVGNRVSDFVNL
DFENYGVDGQFLVGEVVYTDNFGNVITNIPEDAVLKFRTFGSQVEVNGRKVFFVQTYGFVGQGDALILIGSHGFLEIAIN
KGNAALQFGLRSGDTVTIKVL

Specific function: Unknown

COG id: COG1912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002747
- InterPro:   IPR023227
- InterPro:   IPR023228 [H]

Pfam domain/function: PF01887 DUF62 [H]

EC number: NA

Molecular weight: Translated: 28251; Mature: 28119

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIISLTTDFGGLYPAAMKAVILGINPEAQIVDVTHSIRQASIREGAFALYSLVPYFPAK
CEEEEEECCCCCCCHHHEEEEEEECCCCCEEEEEHHHHHHHHHHCCHHEEHHHHCCCCCC
SVHVGVVDPGVGTSRRALALKAGPEGEEQFFVGPDNGLMIPAARRLGDMEVYEITNREIM
CEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEHHHHCCCCEEEEEECCCEEE
LNSEISATFHGRDIFAPVGARLSKGMPIETVGNRVSDFVNLDFENYGVDGQFLVGEVVYT
EECCCEEEECCCEEEECCCHHHHCCCCHHHHHHHHHHEEECCHHHCCCCCEEEEEEEEEE
DNFGNVITNIPEDAVLKFRTFGSQVEVNGRKVFFVQTYGFVGQGDALILIGSHGFLEIAI
CCCCCHHHCCCHHHEEEEEECCCEEEECCEEEEEEEECCEECCCCEEEEEECCCEEEEEE
NKGNAALQFGLRSGDTVTIKVL
ECCCEEEEEECCCCCEEEEEEC
>Mature Secondary Structure 
SIISLTTDFGGLYPAAMKAVILGINPEAQIVDVTHSIRQASIREGAFALYSLVPYFPAK
EEEEEECCCCCCCHHHEEEEEEECCCCCEEEEEHHHHHHHHHHCCHHEEHHHHCCCCCC
SVHVGVVDPGVGTSRRALALKAGPEGEEQFFVGPDNGLMIPAARRLGDMEVYEITNREIM
CEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEHHHHCCCCEEEEEECCCEEE
LNSEISATFHGRDIFAPVGARLSKGMPIETVGNRVSDFVNLDFENYGVDGQFLVGEVVYT
EECCCEEEECCCEEEECCCHHHHCCCCHHHHHHHHHHEEECCHHHCCCCCEEEEEEEEEE
DNFGNVITNIPEDAVLKFRTFGSQVEVNGRKVFFVQTYGFVGQGDALILIGSHGFLEIAI
CCCCCHHHCCCHHHEEEEEECCCEEEECCEEEEEEEECCEECCCCEEEEEECCCEEEEEE
NKGNAALQFGLRSGDTVTIKVL
ECCCEEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]