Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227106

Identifier: 21227106

GI number: 21227106

Start: 1178389

End: 1179231

Strand: Direct

Name: 21227106

Synonym: MM_1004

Alternate gene names: NA

Gene position: 1178389-1179231 (Clockwise)

Preceding gene: 21227104

Following gene: 21227108

Centisome position: 28.77

GC content: 46.14

Gene sequence:

>843_bases
ATGCCTGCAAAAATTCCGATTACCGACAACCATATGCATATAGACCCGAGAGCAAGGGGGCTTGAAGCCGTAAAAGAGTT
CAAGAACTCAGGCGGGACGCATATAATCCTGGTCACCAAACCAAGCTGGTCCCTTGGAATTGCGGTTAAAAAACCTGAAG
ATTACCTTGCTGTATTTGACGAAACAGTGGAAATAGCATCGAAAATCCGGGAGATTGGAGTTGGAGCTTTCCCGGTCTTA
GGAGTTCATCCTGCTGAGATCTCAAAGATTACGGAATATATGGACCTATCAGAAGCAGTAGAAACCATGAAAAAGGGGCT
TGAGCTTGCTGCAGGATATGTGGAAAGAGGCCTTGCAGTGGGAATAAAGTCCGGACGCCCGCACTATCCCGTACCCTCAG
ATGTCTGGGAAGCTTCAAACGAAATTATGGAACATGCCTTTTCTCTCGGAAAAGAACAGGACTGCGCAGTCCAGCTCCAT
ACCGAAAGCGTGCAGGAACCCGAACTTAAGGACATAGCCGAAAGGGCAAGAAAAACAGGAATTAAGATGTACAGGGTAGT
CAAGCATTACTCTCCCCCTCTTGTAAAAACCTGCGAGGAACTGGGGATTTTTCCGGGAGTAATATCGGTTAAAGGGGCGA
TTGAAAAGGCAATTGAAGAGGGGACTCGCTTTATGATGGAAACAGATTATATTGATGACCCTGACAGGCCGGGTGCGGTA
CTTGGACCGAAGACAATCCCTAAAAGAACCATAAAGCTGATGGAAACATATGGAGAAGAGCCCTTCTGGACGATCCATAA
AGAAAATCCGGAAAAAGTCTATGATATAGAGATTGAACTCTGA

Upstream 100 bases:

>100_bases
ATTGCAGAATATAACCCTTCCTTAGTACTCTAATAGAATTGGTTTCAATGGTATAGATAATCTTGAAGAAAGTTTTTAGA
AAATATTCGAGGAAACAAGC

Downstream 100 bases:

>100_bases
AATTTTACCCATGAAGTGAACTGCAAGAAAGCTCAAATTAAGAATTAAACACAGAAAAAATAAGAATTAAACACAGAACA
AACGAAAGAGTGAAAAACTG

Product: putative molybdenum cofactor biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MPAKIPITDNHMHIDPRARGLEAVKEFKNSGGTHIILVTKPSWSLGIAVKKPEDYLAVFDETVEIASKIREIGVGAFPVL
GVHPAEISKITEYMDLSEAVETMKKGLELAAGYVERGLAVGIKSGRPHYPVPSDVWEASNEIMEHAFSLGKEQDCAVQLH
TESVQEPELKDIAERARKTGIKMYRVVKHYSPPLVKTCEELGIFPGVISVKGAIEKAIEEGTRFMMETDYIDDPDRPGAV
LGPKTIPKRTIKLMETYGEEPFWTIHKENPEKVYDIEIEL

Sequences:

>Translated_280_residues
MPAKIPITDNHMHIDPRARGLEAVKEFKNSGGTHIILVTKPSWSLGIAVKKPEDYLAVFDETVEIASKIREIGVGAFPVL
GVHPAEISKITEYMDLSEAVETMKKGLELAAGYVERGLAVGIKSGRPHYPVPSDVWEASNEIMEHAFSLGKEQDCAVQLH
TESVQEPELKDIAERARKTGIKMYRVVKHYSPPLVKTCEELGIFPGVISVKGAIEKAIEEGTRFMMETDYIDDPDRPGAV
LGPKTIPKRTIKLMETYGEEPFWTIHKENPEKVYDIEIEL
>Mature_279_residues
PAKIPITDNHMHIDPRARGLEAVKEFKNSGGTHIILVTKPSWSLGIAVKKPEDYLAVFDETVEIASKIREIGVGAFPVLG
VHPAEISKITEYMDLSEAVETMKKGLELAAGYVERGLAVGIKSGRPHYPVPSDVWEASNEIMEHAFSLGKEQDCAVQLHT
ESVQEPELKDIAERARKTGIKMYRVVKHYSPPLVKTCEELGIFPGVISVKGAIEKAIEEGTRFMMETDYIDDPDRPGAVL
GPKTIPKRTIKLMETYGEEPFWTIHKENPEKVYDIEIEL

Specific function: Unknown

COG id: COG1831

COG function: function code R; Predicted metal-dependent hydrolase (urease superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001130
- InterPro:   IPR011589 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 31233; Mature: 31102

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKIPITDNHMHIDPRARGLEAVKEFKNSGGTHIILVTKPSWSLGIAVKKPEDYLAVFD
CCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCHHHHHHHH
ETVEIASKIREIGVGAFPVLGVHPAEISKITEYMDLSEAVETMKKGLELAAGYVERGLAV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
GIKSGRPHYPVPSDVWEASNEIMEHAFSLGKEQDCAVQLHTESVQEPELKDIAERARKTG
EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
IKMYRVVKHYSPPLVKTCEELGIFPGVISVKGAIEKAIEEGTRFMMETDYIDDPDRPGAV
HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
LGPKTIPKRTIKLMETYGEEPFWTIHKENPEKVYDIEIEL
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEC
>Mature Secondary Structure 
PAKIPITDNHMHIDPRARGLEAVKEFKNSGGTHIILVTKPSWSLGIAVKKPEDYLAVFD
CCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCHHHHHHHH
ETVEIASKIREIGVGAFPVLGVHPAEISKITEYMDLSEAVETMKKGLELAAGYVERGLAV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
GIKSGRPHYPVPSDVWEASNEIMEHAFSLGKEQDCAVQLHTESVQEPELKDIAERARKTG
EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
IKMYRVVKHYSPPLVKTCEELGIFPGVISVKGAIEKAIEEGTRFMMETDYIDDPDRPGAV
HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
LGPKTIPKRTIKLMETYGEEPFWTIHKENPEKVYDIEIEL
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]