| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227099
Identifier: 21227099
GI number: 21227099
Start: 1172097
End: 1172489
Strand: Reverse
Name: 21227099
Synonym: MM_0997
Alternate gene names: NA
Gene position: 1172489-1172097 (Counterclockwise)
Preceding gene: 21227100
Following gene: 21227098
Centisome position: 28.62
GC content: 49.62
Gene sequence:
>393_bases GTGGTAAGGGATATTGCCCCTCTTCTCGATAACAAGTGGTCAGACCCTGCAGTGGTTGTTGTGGACTCAAACCTTAATTT CGCAATTCCTCTCCTTGGAGGGCATCACGGGGCAAATGAGGTCGCCCGAAAAATTGCGGAGTTAGGTGCAGTCCCTGTGC TTACGACAGCTACTGAAGTTCACGGCAAACCCTCGGTGGAGGGCATAGCTGACAGGTTGGGCTGCGAAGTCTTCAATAAA CAATCCACAATAGCTGTGAACTGTGCTCTCCTTGACCAGAATGTGGAGGTCCTTGAGGTTAAGGGTCCCAGGATTGTTGT TGTGGATGATGATGTTTCCGTGCTTGTGAGAAAAAAGCAGGCTGAAAGGGATAAAAGTGCCGGAAACAGCTAA
Upstream 100 bases:
>100_bases AGAGCATCTTGAAGCCGACCTCCTTCTCTACGAAAAGGGCATCTTCAGGAAAGCCTTTGAAAATTACGGGGCAATCGTTG CAGTCTTTGCCACAGGCATT
Downstream 100 bases:
>100_bases AATTAAGGTTCATAGCTAAAATTAGGTTTATAAGTCAATAAATAATGAAACTGCATGAAAAGCAGTGGACAAAAGATTAC TGATGATACTCGGTATCGGA
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: Cobalamin Biosynthesis CbiG Protein; Precorrin Methylase; Cobalamin Biosynthesis Protein; Precorrin-3B; Cobalamin Biosynthesis Protein G; Cobalamin Biosynthesis Precorrin Methylase; Cobalamin Biosynthesis Cbig Protein; Bifunctional Protein; Protein Cbig
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVRDIAPLLDNKWSDPAVVVVDSNLNFAIPLLGGHHGANEVARKIAELGAVPVLTTATEVHGKPSVEGIADRLGCEVFNK QSTIAVNCALLDQNVEVLEVKGPRIVVVDDDVSVLVRKKQAERDKSAGNS
Sequences:
>Translated_130_residues MVRDIAPLLDNKWSDPAVVVVDSNLNFAIPLLGGHHGANEVARKIAELGAVPVLTTATEVHGKPSVEGIADRLGCEVFNK QSTIAVNCALLDQNVEVLEVKGPRIVVVDDDVSVLVRKKQAERDKSAGNS >Mature_130_residues MVRDIAPLLDNKWSDPAVVVVDSNLNFAIPLLGGHHGANEVARKIAELGAVPVLTTATEVHGKPSVEGIADRLGCEVFNK QSTIAVNCALLDQNVEVLEVKGPRIVVVDDDVSVLVRKKQAERDKSAGNS
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13844; Mature: 13844
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRDIAPLLDNKWSDPAVVVVDSNLNFAIPLLGGHHGANEVARKIAELGAVPVLTTATEV CCCCCCHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHC HGKPSVEGIADRLGCEVFNKQSTIAVNCALLDQNVEVLEVKGPRIVVVDDDVSVLVRKKQ CCCCCHHHHHHHHCHHHCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCHHEEHHHHH AERDKSAGNS HHHCCCCCCC >Mature Secondary Structure MVRDIAPLLDNKWSDPAVVVVDSNLNFAIPLLGGHHGANEVARKIAELGAVPVLTTATEV CCCCCCHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHC HGKPSVEGIADRLGCEVFNKQSTIAVNCALLDQNVEVLEVKGPRIVVVDDDVSVLVRKKQ CCCCCHHHHHHHHCHHHCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCHHEEHHHHH AERDKSAGNS HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA