| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227098
Identifier: 21227098
GI number: 21227098
Start: 1171661
End: 1172032
Strand: Reverse
Name: 21227098
Synonym: MM_0996
Alternate gene names: NA
Gene position: 1172032-1171661 (Counterclockwise)
Preceding gene: 21227099
Following gene: 21227097
Centisome position: 28.61
GC content: 48.66
Gene sequence:
>372_bases GTGGACAAAAGATTACTGATGATACTCGGTATCGGAACCCGCAGGGGCATTACAAGGGAAGAAGTCCTTGAAGCCGTAAA ACAGGCGCTTGATGAGTGTGGTCTGAGTCTCCAGGAGATTACGGCTTTTGCCTCTGCAAAACTTAAAGAAAATGAGCGAG GTCTGCTGGAAGCAGGCGAATTTCTCGGCATTCCGGTTAATTTTTTGCCGGATGAAGTGCTGAACAGCTACAACCCTCCT TCATCCTCCCAGGCTTCGCGCTTCGGATTAAAAGGGGTTGCAGAGCCTGCTGCTCTGGCTCTCTCGGAAAAACACGAATT GATTTGCAGGAAGAAAGTCTATGGCAGAGTCACAATCGCAATCGCAAGATAA
Upstream 100 bases:
>100_bases CAGGCTGAAAGGGATAAAAGTGCCGGAAACAGCTAAAATTAAGGTTCATAGCTAAAATTAGGTTTATAAGTCAATAAATA ATGAAACTGCATGAAAAGCA
Downstream 100 bases:
>100_bases GGCATCCGGAAAACTCTATGTAGTAGGGATAGGACCGGGCTCAGTTGAACAGTTAACCCTCAAAGCCCGGGATGTAATCC TCAATGCCGATTATGTTCTT
Product: cobalamin biosynthesis protein G
Products: NA
Alternate protein names: Cobalamin Biosynthesis Protein CbiG; Cobalamin Biosynthesis Cbig Protein; Cobalamin Biosynthesis Protein G; Cobalamin Biosynthesis Precorrin Methylase; CbiG Protein; Cobalt-Precorrin-5A Hydrolase; Cobalamin Biosynthesis Protein G CbiG
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDKRLLMILGIGTRRGITREEVLEAVKQALDECGLSLQEITAFASAKLKENERGLLEAGEFLGIPVNFLPDEVLNSYNPP SSSQASRFGLKGVAEPAALALSEKHELICRKKVYGRVTIAIAR
Sequences:
>Translated_123_residues MDKRLLMILGIGTRRGITREEVLEAVKQALDECGLSLQEITAFASAKLKENERGLLEAGEFLGIPVNFLPDEVLNSYNPP SSSQASRFGLKGVAEPAALALSEKHELICRKKVYGRVTIAIAR >Mature_123_residues MDKRLLMILGIGTRRGITREEVLEAVKQALDECGLSLQEITAFASAKLKENERGLLEAGEFLGIPVNFLPDEVLNSYNPP SSSQASRFGLKGVAEPAALALSEKHELICRKKVYGRVTIAIAR
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13439; Mature: 13439
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRLLMILGIGTRRGITREEVLEAVKQALDECGLSLQEITAFASAKLKENERGLLEAGE CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHCCC FLGIPVNFLPDEVLNSYNPPSSSQASRFGLKGVAEPAALALSEKHELICRKKVYGRVTIA CCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE IAR EEC >Mature Secondary Structure MDKRLLMILGIGTRRGITREEVLEAVKQALDECGLSLQEITAFASAKLKENERGLLEAGE CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHCCC FLGIPVNFLPDEVLNSYNPPSSSQASRFGLKGVAEPAALALSEKHELICRKKVYGRVTIA CCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE IAR EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA