| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is cbiHC [H]
Identifier: 21227097
GI number: 21227097
Start: 1170895
End: 1171692
Strand: Reverse
Name: cbiHC [H]
Synonym: MM_0995
Alternate gene names: 21227097
Gene position: 1171692-1170895 (Counterclockwise)
Preceding gene: 21227098
Following gene: 21227096
Centisome position: 28.6
GC content: 48.37
Gene sequence:
>798_bases ATGGCAGAGTCACAATCGCAATCGCAAGATAAGGCATCCGGAAAACTCTATGTAGTAGGGATAGGACCGGGCTCAGTTGA ACAGTTAACCCTCAAAGCCCGGGATGTAATCCTCAATGCCGATTATGTTCTTGGAAACAGCACTTACCTGGACCAGATGG AAAGCCTTCTCGGCTCTCAGGAAGTGATCCGCAGTTATATGGGAAAAGAGGTCGAAAGGGCACGAAAAGCTGTGGAACTT GCAAAAACCGCAAATGTCGTCATGATCAGTGGTGGGGACACCAATGTCTACGGCATGGCAGGAATAGTGCTTGAGGTAGC AGAACACGAGAACCTTGATGTGGACATTGAAATCCTTCCAGGGGTCACAGCGGTCCTTGCCGGGGCAAGCCTCCTGGGCG CACCAGTTGTTACGGATTTTGCGGTGATCAGTTTAAGCGACCTCTTAACTCCATGGGAAGTAATTGAAAAGCGGCTTAAT ATGGCTGCGGATGCCGACTTTGTGATAGGTCTTTACAACCCGAAGAGCCGCAAGAGAAAATCCAATTTTGCAAGGGCAAT TGAAATTATTCGCAGGTACAAAGCCGATTCCGTACCTGTAGGGCTTGTAAAGAACGCCATGAGAGGCGAGGAAGAAGACC AGATCGTGACGACCCTTGGGGAAGTCATGAATTATGAGGACTGGGTGGACATGAGCACTGCTATTCTCATAGGCAACGGA GAGTCCAGGATCTGGAAGTCTCCGAAAAAGGATATAATAATAACTCCCAGGGGGTATCATAAGAAATATGACTACTGA
Upstream 100 bases:
>100_bases TCATCCTCCCAGGCTTCGCGCTTCGGATTAAAAGGGGTTGCAGAGCCTGCTGCTCTGGCTCTCTCGGAAAAACACGAATT GATTTGCAGGAAGAAAGTCT
Downstream 100 bases:
>100_bases ACAAAAAGCCAATGAAAATGCAGGAAACCTTGAAAACCTCGAAGAATTTACCGAGCTTACAGTGGAAGTAGACCCCGAAC TTGTAAAGATCTGCAATGAC
Product: precorrin-3B C17-methyltransferase
Products: S-adenosyl-L-homocysteine; Precorrin 4
Alternate protein names: Cobalt-precorrin-3B C(17)-methyltransferase; Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase; Cobalt-precorrin-8X methylmutase; Cobalt-precorrin isomerase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAESQSQSQDKASGKLYVVGIGPGSVEQLTLKARDVILNADYVLGNSTYLDQMESLLGSQEVIRSYMGKEVERARKAVEL AKTANVVMISGGDTNVYGMAGIVLEVAEHENLDVDIEILPGVTAVLAGASLLGAPVVTDFAVISLSDLLTPWEVIEKRLN MAADADFVIGLYNPKSRKRKSNFARAIEIIRRYKADSVPVGLVKNAMRGEEEDQIVTTLGEVMNYEDWVDMSTAILIGNG ESRIWKSPKKDIIITPRGYHKKYDY
Sequences:
>Translated_265_residues MAESQSQSQDKASGKLYVVGIGPGSVEQLTLKARDVILNADYVLGNSTYLDQMESLLGSQEVIRSYMGKEVERARKAVEL AKTANVVMISGGDTNVYGMAGIVLEVAEHENLDVDIEILPGVTAVLAGASLLGAPVVTDFAVISLSDLLTPWEVIEKRLN MAADADFVIGLYNPKSRKRKSNFARAIEIIRRYKADSVPVGLVKNAMRGEEEDQIVTTLGEVMNYEDWVDMSTAILIGNG ESRIWKSPKKDIIITPRGYHKKYDY >Mature_264_residues AESQSQSQDKASGKLYVVGIGPGSVEQLTLKARDVILNADYVLGNSTYLDQMESLLGSQEVIRSYMGKEVERARKAVELA KTANVVMISGGDTNVYGMAGIVLEVAEHENLDVDIEILPGVTAVLAGASLLGAPVVTDFAVISLSDLLTPWEVIEKRLNM AADADFVIGLYNPKSRKRKSNFARAIEIIRRYKADSVPVGLVKNAMRGEEEDQIVTTLGEVMNYEDWVDMSTAILIGNGE SRIWKSPKKDIIITPRGYHKKYDY
Specific function: Bifunctional enzyme with a methyltransferase domain that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 and an isomerase domain that catalyzes the conversion of cobalt-precorrin-8X to cobyrinic acid; a methyl migration
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the CobH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014422 - InterPro: IPR003722 - InterPro: IPR006363 [H]
Pfam domain/function: PF02570 CbiC; PF00590 TP_methylase [H]
EC number: 2.1.1.131
Molecular weight: Translated: 29088; Mature: 28956
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESQSQSQDKASGKLYVVGIGPGSVEQLTLKARDVILNADYVLGNSTYLDQMESLLGSQ CCCCCCCCHHHCCCEEEEEEECCCCCHHHEEEHHHEEEECCEEECCCHHHHHHHHHHCHH EVIRSYMGKEVERARKAVELAKTANVVMISGGDTNVYGMAGIVLEVAEHENLDVDIEILP HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHEEECCCCCCCEEEEECC GVTAVLAGASLLGAPVVTDFAVISLSDLLTPWEVIEKRLNMAADADFVIGLYNPKSRKRK CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH SNFARAIEIIRRYKADSVPVGLVKNAMRGEEEDQIVTTLGEVMNYEDWVDMSTAILIGNG HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCEEEEEEECC ESRIWKSPKKDIIITPRGYHKKYDY CHHHCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure AESQSQSQDKASGKLYVVGIGPGSVEQLTLKARDVILNADYVLGNSTYLDQMESLLGSQ CCCCCCCHHHCCCEEEEEEECCCCCHHHEEEHHHEEEECCEEECCCHHHHHHHHHHCHH EVIRSYMGKEVERARKAVELAKTANVVMISGGDTNVYGMAGIVLEVAEHENLDVDIEILP HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHEEECCCCCCCEEEEECC GVTAVLAGASLLGAPVVTDFAVISLSDLLTPWEVIEKRLNMAADADFVIGLYNPKSRKRK CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH SNFARAIEIIRRYKADSVPVGLVKNAMRGEEEDQIVTTLGEVMNYEDWVDMSTAILIGNG HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCEEEEEEECC ESRIWKSPKKDIIITPRGYHKKYDY CHHHCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 3B
Specific reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]