| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mrp [C]
Identifier: 21227092
GI number: 21227092
Start: 1166808
End: 1167716
Strand: Direct
Name: mrp [C]
Synonym: MM_0990
Alternate gene names: 21227092
Gene position: 1166808-1167716 (Clockwise)
Preceding gene: 21227091
Following gene: 21227093
Centisome position: 28.48
GC content: 49.17
Gene sequence:
>909_bases GTGAAAAAGAGATATAAAAATCCGGAAAAATCTGGAAGTTGCGGAAATTTTATACAGGCGATAAAAATGACAGATAAGGT TCAACCACTGGAAAGCTTATCAAAAAAGCCCGAGGAACCGAAAATCGTAGTAAACCTCAGGCGCATCAAGCGTAAGATCA TGGTAATGAGCGGGAAAGGCGGTGTAGGGAAAAGTACGGTTGCCGCAAACCTCGCTGTCGGGCTCGCTCTCCGCGGGCAC AGGGTAGGTCTTCTTGACTGCGATATTCACGGTCCAACGGTCCCCACGATCTTCGGATTGGAGTCCGCAAGACCTGGAGT AAGCGAAGAAGGAATTCTCCCGATAGAGGTGCTCCCCAATCTCTCAGTGATGTCTATTGGTTTTCTGCTCGAAAACAAAG ACTCGCCCATAATCTGGAGGGGGCCCGCCAAAATGGGAGCAATCAAGCAGTTCCTTGAAGAAGTATTCTGGGGAGCACTT GACTTTTTGATTATCGATCTGCCCCCTGGAACCGGAGACGAGCCTCTGAGTGTGGCACAGCTTATCCCCAACTGTGACGG TTCCGTACTTGTCACGACACCTCAGGACGTGGCTCTTATAAGTGTTCGGAAATCAATCACATTTTCGGAAAAACTGAATG TGCCCATAATAGGGCTTGTGGACAACATGCACGGGCTAATCTGCCCCCACTGCGGCAAGCCCATAGAAGTCTTCGGAAGC GGAGGCGTCGAGAAAGCCTCAAAAGACTTTAATATCCCCATCCTTGCCAGACTTCCCATAGAACCCGGAGTCGCGGAAAT GGAAGACAGGGGCACGGTTGTTCAGGACCAGCTTAAACACGGCACGGAATGGCAGAAGAATTTTGATAATGTCGTAGACG CCGTTGAAAAAATACTTGAGAAAGAGTAA
Upstream 100 bases:
>100_bases CTTGCTCTGAGCACCGGAAAAGCAATAGAAATTAAAGGCGGTAACTATATCAGGATCGAGACTGCTGATACCAATGAAGA TGCTGACAAGATGCTGACTC
Downstream 100 bases:
>100_bases GTCAAACTTCTTTGTTTTCTCTTTTTTCCTTATTTTATTTTTATCAGTTCTCTATATATAAAACCCATGTCTGCAACGGG CCTCTAATATAGTTATTGAT
Product: nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKGGVGKSTVAANLAVGLALRGH RVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPNLSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGAL DFLIIDLPPGTGDEPLSVAQLIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILEKE
Sequences:
>Translated_302_residues MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKGGVGKSTVAANLAVGLALRGH RVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPNLSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGAL DFLIIDLPPGTGDEPLSVAQLIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILEKE >Mature_302_residues MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKGGVGKSTVAANLAVGLALRGH RVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPNLSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGAL DFLIIDLPPGTGDEPLSVAQLIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILEKE
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI118572611, Length=231, Percent_Identity=49.3506493506493, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI6912540, Length=231, Percent_Identity=39.3939393939394, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI157384956, Length=225, Percent_Identity=41.3333333333333, Blast_Score=172, Evalue=3e-43, Organism=Escherichia coli, GI87082045, Length=252, Percent_Identity=41.6666666666667, Blast_Score=194, Evalue=7e-51, Organism=Caenorhabditis elegans, GI25143050, Length=238, Percent_Identity=46.6386554621849, Blast_Score=218, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6322188, Length=229, Percent_Identity=45.4148471615721, Blast_Score=213, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321347, Length=276, Percent_Identity=41.6666666666667, Blast_Score=192, Evalue=4e-50, Organism=Drosophila melanogaster, GI24667611, Length=241, Percent_Identity=46.0580912863071, Blast_Score=215, Evalue=3e-56, Organism=Drosophila melanogaster, GI19921440, Length=250, Percent_Identity=42.8, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI221511043, Length=251, Percent_Identity=39.0438247011952, Blast_Score=160, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 32782; Mature: 32782
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKG CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEHHHHCEEEEEEECCC GVGKSTVAANLAVGLALRGHRVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPN CCCCHHHHHHHHHEEEECCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCC LSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGALDFLIIDLPPGTGDEPLSVAQ CCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH LIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS HCCCCCCCEEEECCCCEEEEEEHHHEEEHHCCCCCEEEEECCCCCEECCCCCCCEEEECC GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILE CCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC KE CC >Mature Secondary Structure MKKRYKNPEKSGSCGNFIQAIKMTDKVQPLESLSKKPEEPKIVVNLRRIKRKIMVMSGKG CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEHHHHCEEEEEEECCC GVGKSTVAANLAVGLALRGHRVGLLDCDIHGPTVPTIFGLESARPGVSEEGILPIEVLPN CCCCHHHHHHHHHEEEECCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCC LSVMSIGFLLENKDSPIIWRGPAKMGAIKQFLEEVFWGALDFLIIDLPPGTGDEPLSVAQ CCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH LIPNCDGSVLVTTPQDVALISVRKSITFSEKLNVPIIGLVDNMHGLICPHCGKPIEVFGS HCCCCCCCEEEECCCCEEEEEEHHHEEEHHCCCCCEEEEECCCCCEECCCCCCCEEEECC GGVEKASKDFNIPILARLPIEPGVAEMEDRGTVVQDQLKHGTEWQKNFDNVVDAVEKILE CCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC KE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]