| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is trxA [H]
Identifier: 21227093
GI number: 21227093
Start: 1168022
End: 1168519
Strand: Direct
Name: trxA [H]
Synonym: MM_0991
Alternate gene names: 21227093
Gene position: 1168022-1168519 (Clockwise)
Preceding gene: 21227092
Following gene: 21227094
Centisome position: 28.51
GC content: 44.78
Gene sequence:
>498_bases ATGAATAGGCTAGTCATATTACTGATCCTGCTTGCAGCTGTACTCTTTACAGCAGGCTGTACTGAAGACGGGGACAACTC CACAGACGCTCAGCAAATCCAGGTAAGTGTTGTTGAAAACTTAACCGCTCTGGAACAGATTAACACATCCGTACAGGAAG GCCCGGTCCTTATCAAATTCGGAGCTGAATGGTGTGGGCCGTGCCAGCAGATGAAACCCATCCTGAGTGACCTGGCAGCA GAATACACCGGAAAAGCCACAGTCATGTCTGCAGACATAGATCAGAGCCGTAATCTTTCAGCTTATTTCGTAACGTCTTA TATTCCGGATTCCTTTGTGGTTGTTGGTCTTGAAGACGGAGAGTATGTTTACATGCAGGATAACGGAAACGTCACTAAAG ACAGATTCCAGGCAAGAGTTCTTGGGGTTATGGATAAACAGGTATACGAAGAACTCCTGGATAGAGCAATTCTTTACCAT GAAAACGTAAATAAATAA
Upstream 100 bases:
>100_bases GGCTTTCAGGACTATTAAAAGAAAATTATTAGTGTAACGAGAAAATCACTGATATTAAAAACCTGAAGAAATACCAAATG AACGAATCAATGTTGAGAAC
Downstream 100 bases:
>100_bases AAAAGCAATACAGTGAAATCTGAGTTTTAAACTTCCTCGCCAGCTGAAAATTAAATCATCAGCTGAAAATAAAACATATT AAATGGTTAGGACTGAAAAC
Product: Thiol-disulfide isomerase/thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNRLVILLILLAAVLFTAGCTEDGDNSTDAQQIQVSVVENLTALEQINTSVQEGPVLIKFGAEWCGPCQQMKPILSDLAA EYTGKATVMSADIDQSRNLSAYFVTSYIPDSFVVVGLEDGEYVYMQDNGNVTKDRFQARVLGVMDKQVYEELLDRAILYH ENVNK
Sequences:
>Translated_165_residues MNRLVILLILLAAVLFTAGCTEDGDNSTDAQQIQVSVVENLTALEQINTSVQEGPVLIKFGAEWCGPCQQMKPILSDLAA EYTGKATVMSADIDQSRNLSAYFVTSYIPDSFVVVGLEDGEYVYMQDNGNVTKDRFQARVLGVMDKQVYEELLDRAILYH ENVNK >Mature_165_residues MNRLVILLILLAAVLFTAGCTEDGDNSTDAQQIQVSVVENLTALEQINTSVQEGPVLIKFGAEWCGPCQQMKPILSDLAA EYTGKATVMSADIDQSRNLSAYFVTSYIPDSFVVVGLEDGEYVYMQDNGNVTKDRFQARVLGVMDKQVYEELLDRAILYH ENVNK
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 18276; Mature: 18276
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLVILLILLAAVLFTAGCTEDGDNSTDAQQIQVSVVENLTALEQINTSVQEGPVLIKF CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEE GAEWCGPCQQMKPILSDLAAEYTGKATVMSADIDQSRNLSAYFVTSYIPDSFVVVGLEDG CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEECCC EYVYMQDNGNVTKDRFQARVLGVMDKQVYEELLDRAILYHENVNK CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNRLVILLILLAAVLFTAGCTEDGDNSTDAQQIQVSVVENLTALEQINTSVQEGPVLIKF CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEE GAEWCGPCQQMKPILSDLAAEYTGKATVMSADIDQSRNLSAYFVTSYIPDSFVVVGLEDG CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEECCC EYVYMQDNGNVTKDRFQARVLGVMDKQVYEELLDRAILYHENVNK CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]