Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227086

Identifier: 21227086

GI number: 21227086

Start: 1162682

End: 1163377

Strand: Reverse

Name: 21227086

Synonym: MM_0984

Alternate gene names: NA

Gene position: 1163377-1162682 (Counterclockwise)

Preceding gene: 21227087

Following gene: 21227085

Centisome position: 28.4

GC content: 46.41

Gene sequence:

>696_bases
ATGGATTATACTCAGCTTGCAGAGAAACTGGTCAAGTACCTTGGCCTTAAATACGAACCGGTTGCAGTGAAAGTTATTAA
GAAAGGAGAGCCGATGCCCGAAGGGTACAGCGAGCCCGATAAAAATCTCAGGCACTGCCAGTCCATTATGAAAGCCAGAA
AAGGAGAGTCTTTTATAATTCCTGCTGATAAGCATGCCTGCGTGGTAGGAGCTTCAAGCCTGGGGATTATCCCTACACCT
GAAAAGGTAGCTTCGGGGGAGTTCCATCATAACCTGGGGATGTTTGACAGCGTGGAAGCTGCAGCCGAAATGATAGGTAA
ACGCCCTAAGTTTGAGCCTGAAAGCAGGGTTGCAACCGTCGTAGGCCCTCTGAAAGATGCAAAAGTTGACCCTGACGTGG
TTATTCTTGTAGACAGGCCGGAAACCATTTACTGGATTATTCCTGCAAGCACTTACCATAAAGGCGGAAGGGCTAACTTT
AGCAGTGCGGCTTTCCAGGCAACCTGCGCCGATACAACCATCCTGCCAAACCTGACAGGAGAAATAAATATTTCTTTAGG
CTGCTTCGGGTGCAGAAAAGCTACGGACATCGAAAATGATGAAATGCTTGTGGGCATTCCTTTCAATAAACTTGAAGAAA
TTGTTAACGTTCTTGAAAAGCTCTATGAAGGTCCTATGCCTAAGGCAAGGAAGTAA

Upstream 100 bases:

>100_bases
ACAGCAGGCAATTCTATAGTAGTAAGGATAGTTCTATAGTAGTTCAATAAGCAGTAAATTCGACGAGTAGTGGTTCACAA
ATAGTCGGTGAGGGAATAAC

Downstream 100 bases:

>100_bases
ACTTCTTGAGACTTTAATTTTTCCTTATTTTTCAATGAGATTTTTTTCTTTTTTCATTGAGCTTTTTTAATCTGGTTTGC
TCATCATAAGCTCTCCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDYTQLAEKLVKYLGLKYEPVAVKVIKKGEPMPEGYSEPDKNLRHCQSIMKARKGESFIIPADKHACVVGASSLGIIPTP
EKVASGEFHHNLGMFDSVEAAAEMIGKRPKFEPESRVATVVGPLKDAKVDPDVVILVDRPETIYWIIPASTYHKGGRANF
SSAAFQATCADTTILPNLTGEINISLGCFGCRKATDIENDEMLVGIPFNKLEEIVNVLEKLYEGPMPKARK

Sequences:

>Translated_231_residues
MDYTQLAEKLVKYLGLKYEPVAVKVIKKGEPMPEGYSEPDKNLRHCQSIMKARKGESFIIPADKHACVVGASSLGIIPTP
EKVASGEFHHNLGMFDSVEAAAEMIGKRPKFEPESRVATVVGPLKDAKVDPDVVILVDRPETIYWIIPASTYHKGGRANF
SSAAFQATCADTTILPNLTGEINISLGCFGCRKATDIENDEMLVGIPFNKLEEIVNVLEKLYEGPMPKARK
>Mature_231_residues
MDYTQLAEKLVKYLGLKYEPVAVKVIKKGEPMPEGYSEPDKNLRHCQSIMKARKGESFIIPADKHACVVGASSLGIIPTP
EKVASGEFHHNLGMFDSVEAAAEMIGKRPKFEPESRVATVVGPLKDAKVDPDVVILVDRPETIYWIIPASTYHKGGRANF
SSAAFQATCADTTILPNLTGEINISLGCFGCRKATDIENDEMLVGIPFNKLEEIVNVLEKLYEGPMPKARK

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003748 [H]

Pfam domain/function: PF02596 DUF169 [H]

EC number: NA

Molecular weight: Translated: 25348; Mature: 25348

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYTQLAEKLVKYLGLKYEPVAVKVIKKGEPMPEGYSEPDKNLRHCQSIMKARKGESFII
CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
PADKHACVVGASSLGIIPTPEKVASGEFHHNLGMFDSVEAAAEMIGKRPKFEPESRVATV
ECCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
VGPLKDAKVDPDVVILVDRPETIYWIIPASTYHKGGRANFSSAAFQATCADTTILPNLTG
ECCCCCCCCCCCEEEEEECCCEEEEEEECHHCCCCCCCCCCCHHEEEECCCCEECCCCCC
EINISLGCFGCRKATDIENDEMLVGIPFNKLEEIVNVLEKLYEGPMPKARK
EEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDYTQLAEKLVKYLGLKYEPVAVKVIKKGEPMPEGYSEPDKNLRHCQSIMKARKGESFII
CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
PADKHACVVGASSLGIIPTPEKVASGEFHHNLGMFDSVEAAAEMIGKRPKFEPESRVATV
ECCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
VGPLKDAKVDPDVVILVDRPETIYWIIPASTYHKGGRANFSSAAFQATCADTTILPNLTG
ECCCCCCCCCCCEEEEEECCCEEEEEEECHHCCCCCCCCCCCHHEEEECCCCEECCCCCC
EINISLGCFGCRKATDIENDEMLVGIPFNKLEEIVNVLEKLYEGPMPKARK
EEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]