Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227085

Identifier: 21227085

GI number: 21227085

Start: 1161959

End: 1162567

Strand: Reverse

Name: 21227085

Synonym: MM_0983

Alternate gene names: NA

Gene position: 1162567-1161959 (Counterclockwise)

Preceding gene: 21227086

Following gene: 21227084

Centisome position: 28.38

GC content: 41.71

Gene sequence:

>609_bases
ATGGAAATATTTATACCTGCAAAGTTTATTTATGATTGTAGTACCTATCGTGTTAAAGACCCCGGGAGAAAAAGTGTGCA
GTGCGCGTTGTGCAGGAATAAGGAATGCCTGATAGGCAAAAACTGCTCTGTTATAAAATCGGGACTTGATTACAGCGGCG
ATAACCTTAAGTCAATCCAGATTTCAGCCTGGCTTGAATCGGACCCTACCAAGAGAACAAAGCTAGAGGAAATTGCAATT
TACTCGAAAAGGCTCGGGTACAGAAAGATAGGTATCGCTTTCTGTATCGAACATGAAAGGGAAGCAAGGCTTGTTTACGA
CATCCTTTCAAGGTATTTCGATGTATTTTCAGTTTGCTGCAAGGTTTGCAGTATTGAAAAAGAAAGCCTGGATATCAGGA
AAACCGTTGAATCGGAATTTGAGGCGGCCTGTAATCCCATAGGGCAGGCTCTTCTCCTTAATGATGACCGAACTGACCTC
AATATTATGCTCGGTCTTAAAACAGGTTATGACATTCTATTCGCAAAATATTCGGAAGCCCCTTCAATAACGCTTCCTCT
TCTGGAACTTCCCTCTACTGGGGATTCCGAGATCGATTTTATAGAATAA

Upstream 100 bases:

>100_bases
TAATTTTTCCTTATTTTTCAATGAGATTTTTTTCTTTTTTCATTGAGCTTTTTTAATCTGGTTTGCTCATCATAAGCTCT
CCAGTATATTTCTTTATTTT

Downstream 100 bases:

>100_bases
AATTTAAATCTGGTGTAACTATTCAGGTAGAGCCTTTGAAAGGCTACAATTTTTCCTCTTTTCGAGGAAAAATTGCATAT
AAATTGAATCCTATTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEIFIPAKFIYDCSTYRVKDPGRKSVQCALCRNKECLIGKNCSVIKSGLDYSGDNLKSIQISAWLESDPTKRTKLEEIAI
YSKRLGYRKIGIAFCIEHEREARLVYDILSRYFDVFSVCCKVCSIEKESLDIRKTVESEFEAACNPIGQALLLNDDRTDL
NIMLGLKTGYDILFAKYSEAPSITLPLLELPSTGDSEIDFIE

Sequences:

>Translated_202_residues
MEIFIPAKFIYDCSTYRVKDPGRKSVQCALCRNKECLIGKNCSVIKSGLDYSGDNLKSIQISAWLESDPTKRTKLEEIAI
YSKRLGYRKIGIAFCIEHEREARLVYDILSRYFDVFSVCCKVCSIEKESLDIRKTVESEFEAACNPIGQALLLNDDRTDL
NIMLGLKTGYDILFAKYSEAPSITLPLLELPSTGDSEIDFIE
>Mature_202_residues
MEIFIPAKFIYDCSTYRVKDPGRKSVQCALCRNKECLIGKNCSVIKSGLDYSGDNLKSIQISAWLESDPTKRTKLEEIAI
YSKRLGYRKIGIAFCIEHEREARLVYDILSRYFDVFSVCCKVCSIEKESLDIRKTVESEFEAACNPIGQALLLNDDRTDL
NIMLGLKTGYDILFAKYSEAPSITLPLLELPSTGDSEIDFIE

Specific function: Unknown

COG id: COG4887

COG function: function code R; Uncharacterized metal-binding protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014997 [H]

Pfam domain/function: PF08901 DUF1847 [H]

EC number: NA

Molecular weight: Translated: 22880; Mature: 22880

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFIPAKFIYDCSTYRVKDPGRKSVQCALCRNKECLIGKNCSVIKSGLDYSGDNLKSIQ
CEEEECHHEEECCCCEEECCCCCCCEEEEEECCCCEEECCCHHHHHCCCCCCCCCEEEEE
ISAWLESDPTKRTKLEEIAIYSKRLGYRKIGIAFCIEHEREARLVYDILSRYFDVFSVCC
EEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
KVCSIEKESLDIRKTVESEFEAACNPIGQALLLNDDRTDLNIMLGLKTGYDILFAKYSEA
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCEEEEEECCCC
PSITLPLLELPSTGDSEIDFIE
CCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEIFIPAKFIYDCSTYRVKDPGRKSVQCALCRNKECLIGKNCSVIKSGLDYSGDNLKSIQ
CEEEECHHEEECCCCEEECCCCCCCEEEEEECCCCEEECCCHHHHHCCCCCCCCCEEEEE
ISAWLESDPTKRTKLEEIAIYSKRLGYRKIGIAFCIEHEREARLVYDILSRYFDVFSVCC
EEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
KVCSIEKESLDIRKTVESEFEAACNPIGQALLLNDDRTDLNIMLGLKTGYDILFAKYSEA
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCEEEEEECCCC
PSITLPLLELPSTGDSEIDFIE
CCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]