| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is fno [H]
Identifier: 21227079
GI number: 21227079
Start: 1158274
End: 1158981
Strand: Direct
Name: fno [H]
Synonym: MM_0977
Alternate gene names: 21227079
Gene position: 1158274-1158981 (Clockwise)
Preceding gene: 21227077
Following gene: 21227080
Centisome position: 28.28
GC content: 44.77
Gene sequence:
>708_bases TTGAATTCTGAAAAGCTAAAAATAGCTGTTCTAGGAGGAACCGGCAATATAGGAGAAGGAATGGTACTGAGACTTGCCCT TCAAAACCTTATGCCTGAAGGTGTGAAGAATGAGATAATTATTGGATCCAGATCTCTGGAAACTGCAGAAGAAGCTGCAA AAAAAGCGTTATCAGAACTTGAGAACTGCGGGTTCGATACGTCCGGCATAAAGATTACCGGAATGAATAACTTTGAAGCT GCAAAAGCAGCCGAAATGGCAATACTCACGATCCGTTTTGACCATGTTCTTCCTCTTCTGGAAGAAATAAAAGAGACACT TGAGAATAAAATAGTTATTTCTCCGGTAGTCCCAATGGTGAAAGAAGGTAGCTTTATGGCGTACAGGCCTCCTGCAGAGG GTTCGGCAGCTCTTGCAATCCAGAAAAATGTCCCGGAGACCACGAAAGTTGTTGCAGCCTTCCATAATATTCCTGCAGGA AAACTCAAGGATGTTGTTAAATGCAAAGCAGTGCACGACGCACTTGTTTGCAGCGATGACGAAGAGGCAAAGAAACTGGT CATGGAGCTTACACGGCATATGGGATGCCTCAAACCCCTTGATGGAGGCCCCCTTAAGCAGGCAGCTACCATGGAATCCC TGACCCCGCTACTTATAAATCTGGCGAAATTGAACGGGCTTAAAGACCTCGGAATAAATTTCTCCTGA
Upstream 100 bases:
>100_bases ATAACATTAAGTATTATAATCATATGATTTAAGACAGAAGATATATTAACTTCCTGACATATGTTATGGGAAGACATAGC AAACTGGAGGTCCTGTTCAA
Downstream 100 bases:
>100_bases ACAATCCAGGCAAAAATGTCAGGGAAAACGTATATAAGGAATGAAGTTTGCCGAAAAAGGAATTAAAGGGTGAAGGGCTT ACTCAAAAAATTTCTCTTAT
Product: F420-dependent NADP reductase
Products: NA
Alternate protein names: F420H2:NADP oxidoreductase [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MNSEKLKIAVLGGTGNIGEGMVLRLALQNLMPEGVKNEIIIGSRSLETAEEAAKKALSELENCGFDTSGIKITGMNNFEA AKAAEMAILTIRFDHVLPLLEEIKETLENKIVISPVVPMVKEGSFMAYRPPAEGSAALAIQKNVPETTKVVAAFHNIPAG KLKDVVKCKAVHDALVCSDDEEAKKLVMELTRHMGCLKPLDGGPLKQAATMESLTPLLINLAKLNGLKDLGINFS
Sequences:
>Translated_235_residues MNSEKLKIAVLGGTGNIGEGMVLRLALQNLMPEGVKNEIIIGSRSLETAEEAAKKALSELENCGFDTSGIKITGMNNFEA AKAAEMAILTIRFDHVLPLLEEIKETLENKIVISPVVPMVKEGSFMAYRPPAEGSAALAIQKNVPETTKVVAAFHNIPAG KLKDVVKCKAVHDALVCSDDEEAKKLVMELTRHMGCLKPLDGGPLKQAATMESLTPLLINLAKLNGLKDLGINFS >Mature_235_residues MNSEKLKIAVLGGTGNIGEGMVLRLALQNLMPEGVKNEIIIGSRSLETAEEAAKKALSELENCGFDTSGIKITGMNNFEA AKAAEMAILTIRFDHVLPLLEEIKETLENKIVISPVVPMVKEGSFMAYRPPAEGSAALAIQKNVPETTKVVAAFHNIPAG KLKDVVKCKAVHDALVCSDDEEAKKLVMELTRHMGCLKPLDGGPLKQAATMESLTPLLINLAKLNGLKDLGINFS
Specific function: Catalyzes the reduction of NADP(+) with F420H(2) via hydride transfer, and the reverse reaction, i.e. the reduction of F420 with NADPH. Probably functions in the regeneration of NADPH required in biosynthetic reactions [H]
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the F420-dependent NADP reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR010185 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: NA
Molecular weight: Translated: 25188; Mature: 25188
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEKLKIAVLGGTGNIGEGMVLRLALQNLMPEGVKNEIIIGSRSLETAEEAAKKALSEL CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHH ENCGFDTSGIKITGMNNFEAAKAAEMAILTIRFDHVLPLLEEIKETLENKIVISPVVPMV HHCCCCCCCEEEEECCCCCHHHHHHEEEEEEEHHHHHHHHHHHHHHHHCCEEEECCCHHH KEGSFMAYRPPAEGSAALAIQKNVPETTKVVAAFHNIPAGKLKDVVKCKAVHDALVCSDD HCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC EEAKKLVMELTRHMGCLKPLDGGPLKQAATMESLTPLLINLAKLNGLKDLGINFS HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC >Mature Secondary Structure MNSEKLKIAVLGGTGNIGEGMVLRLALQNLMPEGVKNEIIIGSRSLETAEEAAKKALSEL CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHH ENCGFDTSGIKITGMNNFEAAKAAEMAILTIRFDHVLPLLEEIKETLENKIVISPVVPMV HHCCCCCCCEEEEECCCCCHHHHHHEEEEEEEHHHHHHHHHHHHHHHHCCEEEECCCHHH KEGSFMAYRPPAEGSAALAIQKNVPETTKVVAAFHNIPAGKLKDVVKCKAVHDALVCSDD HCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC EEAKKLVMELTRHMGCLKPLDGGPLKQAATMESLTPLLINLAKLNGLKDLGINFS HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]