| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227074
Identifier: 21227074
GI number: 21227074
Start: 1151247
End: 1151483
Strand: Direct
Name: 21227074
Synonym: MM_0972
Alternate gene names: NA
Gene position: 1151247-1151483 (Clockwise)
Preceding gene: 21227071
Following gene: 21227075
Centisome position: 28.1
GC content: 43.88
Gene sequence:
>237_bases ATGGGTATTCGTACAATTTATGATACGATCAGACAGGGAGAGACAAACCTGCATGAAAAAAGTGTAAGTAGCGGCCTGAC CCTTCTGGTAGTGGATCTTAACTGGGGAGATTCGACTGATTCACTCCGGCTTAAGGTGTATACTCCGAGTGGCGCATTGC TGGGTACATACTATGATAATGCAGACGGCCAAACTGACGGTAGGATTTATCTCTATATCCTTAGTTTGACAGTATAA
Upstream 100 bases:
>100_bases TGCAACAGCAACAACTGAGAATATAGATAAAGCAGAAATCTCAAGTAATTACATCGTAACACCTGCAATTGACACTGAAG CCTAGACAGTTAACGAGGAA
Downstream 100 bases:
>100_bases ATTAAATTTAGTGAGAAGCTTCAATTTTTTGTCAAAAATCAATTGACAGTATTCATAAATTCCATCAAATTGCCTCTGAT TCTCCAGCTTCACAATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MGIRTIYDTIRQGETNLHEKSVSSGLTLLVVDLNWGDSTDSLRLKVYTPSGALLGTYYDNADGQTDGRIYLYILSLTV
Sequences:
>Translated_78_residues MGIRTIYDTIRQGETNLHEKSVSSGLTLLVVDLNWGDSTDSLRLKVYTPSGALLGTYYDNADGQTDGRIYLYILSLTV >Mature_77_residues GIRTIYDTIRQGETNLHEKSVSSGLTLLVVDLNWGDSTDSLRLKVYTPSGALLGTYYDNADGQTDGRIYLYILSLTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8630; Mature: 8499
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRTIYDTIRQGETNLHEKSVSSGLTLLVVDLNWGDSTDSLRLKVYTPSGALLGTYYDN CCHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECC ADGQTDGRIYLYILSLTV CCCCCCCEEEEEEEEEEC >Mature Secondary Structure GIRTIYDTIRQGETNLHEKSVSSGLTLLVVDLNWGDSTDSLRLKVYTPSGALLGTYYDN CHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECC ADGQTDGRIYLYILSLTV CCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA