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The map label for this gene is 21227071

Identifier: 21227071

GI number: 21227071

Start: 1147583

End: 1148617

Strand: Direct

Name: 21227071

Synonym: MM_0969

Alternate gene names: NA

Gene position: 1147583-1148617 (Clockwise)

Preceding gene: 21227070

Following gene: 21227074

Centisome position: 28.01

GC content: 52.46

Gene sequence:

>1035_bases
ATGGCAGAAAAGAAACCAATAAGCAAAAGTTACCTTGACCTGAAATCAAAAGTCTGGGACACAGGACTCTGCTCAGGCTG
CGGAGCCTGCATTGCAGTCTGCCCTGCTGATGCCCTGTACTTCGAAACAGGCGGCGATTCCACACACCCGAAAAGCAACA
ATTACTGTAAAGCTGCTGTTGATGATGTGCCCTGTGGAGCCTGCTATGAAGTGTGCCCGAGGCTTGACGAACAACCTTCA
AGCCTGCTAGGGGACTACCTGAAAATCACTGCCGGAAAAGCCGAGTTCGATATCCCGAGAAAACAGAGCGGAGGGGCCGT
CACTGCAATCCTTGCAAATGCTCTCGACACCGGCCTCGTGGACGCCGTGGTTACGGTTACTGAAGACCCCTGGACTCTCA
AGCCGCGCTCTATGGTAATTACCAGGAGTGAAGCCCTCATTGGCCAGGCAGGAAGCCGCTATAACTGGTGGGTCCCTCTT
GTCTCTTCCCTCAAGGAAGCGGTTATAAACAAGAAGTACAGGAACATTGCAGTTGTCGGAGTGCCCTGCGTTATCCAGGC
TGTCCGCAAGATGCTTGAGTCCGACCACCAGCTGGTCAGCCCCTACAAGAAGTCAATCCGCTTCGTACTCGGGCTCTTCT
GTACCGAAAACTTCGACTACGAAAAACTCGTTGCTGGCAAGCTGAAAAGCGAGTATGCACTCGAGCCAATGAAAGTCTGC
CGCATTGATGTTAAAGGCAAGCTCGAAATCACACTTAATGACGGGACCCAGTATGTGATTCCTCTTACCGAACTTGAGGA
CACGGTACGCCCGGGATGCAGTGTCTGTACGGACTTTACCGCTCTTAAGTCCGACATTTCTGCCGGTTCGGTAGGCAGTC
CCGACGGTTACACAACCCTGATCGTCCGCACCCTTGTAGGGCAGCACCTCCTTGACAGCGCAGTTGCTAGTGGGAAGCTG
AGTTTAGACGGCGAAGTCAGCCTTGGCATTATTGAGAAGCTTGCAAAGAAAAAGATGGCAAGAAAGCCGGAGTAA

Upstream 100 bases:

>100_bases
CGGGTATGACCCCGCGGAGTTCCTGGACACTAACTATACAAGGATCGGACCTGCAAGCAGCCGGCCTTTTGCAAGCAAAT
ACGTCTGGGAGTGATCAGAA

Downstream 100 bases:

>100_bases
CTAGTAAACTTAAAGGTGAAGTTTCAGGCTTCATCTTTATTTCATTTTTTTGTGCTTTTTTGACTTTCACATTTGTGTAA
TTTTGCCTGTTATTTCCCAC

Product: coenzyme F420 hydrogenase subunit beta

Products: reduced coenzyme F420

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAEKKPISKSYLDLKSKVWDTGLCSGCGACIAVCPADALYFETGGDSTHPKSNNYCKAAVDDVPCGACYEVCPRLDEQPS
SLLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLVDAVVTVTEDPWTLKPRSMVITRSEALIGQAGSRYNWWVPL
VSSLKEAVINKKYRNIAVVGVPCVIQAVRKMLESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVC
RIDVKGKLEITLNDGTQYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSPDGYTTLIVRTLVGQHLLDSAVASGKL
SLDGEVSLGIIEKLAKKKMARKPE

Sequences:

>Translated_344_residues
MAEKKPISKSYLDLKSKVWDTGLCSGCGACIAVCPADALYFETGGDSTHPKSNNYCKAAVDDVPCGACYEVCPRLDEQPS
SLLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLVDAVVTVTEDPWTLKPRSMVITRSEALIGQAGSRYNWWVPL
VSSLKEAVINKKYRNIAVVGVPCVIQAVRKMLESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVC
RIDVKGKLEITLNDGTQYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSPDGYTTLIVRTLVGQHLLDSAVASGKL
SLDGEVSLGIIEKLAKKKMARKPE
>Mature_343_residues
AEKKPISKSYLDLKSKVWDTGLCSGCGACIAVCPADALYFETGGDSTHPKSNNYCKAAVDDVPCGACYEVCPRLDEQPSS
LLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLVDAVVTVTEDPWTLKPRSMVITRSEALIGQAGSRYNWWVPLV
SSLKEAVINKKYRNIAVVGVPCVIQAVRKMLESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVCR
IDVKGKLEITLNDGTQYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSPDGYTTLIVRTLVGQHLLDSAVASGKLS
LDGEVSLGIIEKLAKKKMARKPE

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525 [H]

Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: 1.12.98.1

Molecular weight: Translated: 37194; Mature: 37063

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKPISKSYLDLKSKVWDTGLCSGCGACIAVCPADALYFETGGDSTHPKSNNYCKAAV
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECC
DDVPCGACYEVCPRLDEQPSSLLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLV
CCCCCCHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DAVVTVTEDPWTLKPRSMVITRSEALIGQAGSRYNWWVPLVSSLKEAVINKKYRNIAVVG
HEEEEEECCCCEECCCEEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
VPCVIQAVRKMLESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVC
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHE
RIDVKGKLEITLNDGTQYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSPDGYTTL
EEECCCEEEEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH
IVRTLVGQHLLDSAVASGKLSLDGEVSLGIIEKLAKKKMARKPE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEKKPISKSYLDLKSKVWDTGLCSGCGACIAVCPADALYFETGGDSTHPKSNNYCKAAV
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECC
DDVPCGACYEVCPRLDEQPSSLLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLV
CCCCCCHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DAVVTVTEDPWTLKPRSMVITRSEALIGQAGSRYNWWVPLVSSLKEAVINKKYRNIAVVG
HEEEEEECCCCEECCCEEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
VPCVIQAVRKMLESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVC
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHE
RIDVKGKLEITLNDGTQYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSPDGYTTL
EEECCCEEEEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH
IVRTLVGQHLLDSAVASGKLSLDGEVSLGIIEKLAKKKMARKPE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]