| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227073
Identifier: 21227073
GI number: 21227073
Start: 1149719
End: 1150597
Strand: Reverse
Name: 21227073
Synonym: MM_0971
Alternate gene names: NA
Gene position: 1150597-1149719 (Counterclockwise)
Preceding gene: 21227076
Following gene: 21227072
Centisome position: 28.09
GC content: 38.0
Gene sequence:
>879_bases GTGCCTGATACAATGCCTGAATCGCCTTATCGGTACCTATTGGAAGCAGATAATGAAGAGCAGGAAATTTTGTTCAGTTA TATTGAAAATTGCTATGTCTCTGATGAAGAAAAGAAAGAAATGAAAAAAGCAATGAAAGATATCTGGAAAAGAGGTCCTG ATCAAATAACTGAGCAAGATAACCTAATGCTTGATAAAGTTGCTAAGTCAACTGCCGAATATCTTAATGATAAATATGGC AATGTTGGAATTAAATGGTCTGGGCCTAATATGCATGGAGACATTATACATATTGCGTGCATAAAATGGGGTGTCAGTAC ATCTAATGCACAGACTGCAAACAACTCTGCTCCTGTTCCAGATACTTGGAATAGTGGATTCTGGCAGTCATATAATCATT ACTATGACCCTGTTCTTAATACCGGCTATGCTCCCACTAATTGCGCGAATCGTGCAAATATTGCTAAAGATTACTATAAC AGCGGTCAATATACTAGTGCATATCAACATCTTGGATATTCAAGCCATTACATGGCTGATCTAGGAAACCCTATGCATAC AGGTAAGGAATCTGAACAGTATCTAAATCAATGGGTTCACACTTCCTATGAGTCGTATGTAGCCAATAACTGGAATACAG GATATAACTATAAAAATGTAGTACAAAACACTGGTACTTACTACTCAATAACCAATCCTGAACAATCTGCCAAAAATTTA GCAAGTGCGACCCGCTCCGATTTGAATGCTTTATACGACGCGGTTTTCTATTATCCAGATACTTTTGGATCCGATTCTGA CGTAATCGAAATCACACAAAGAGTTCTGGGGAAGACAGCAAAGTACAATATGGGGCTTGTAAAGTATGTGAGAGGGTAA
Upstream 100 bases:
>100_bases GTTTGTGCCAGCAGTAAGTGCTGAAACACTAACTGAAGATGCCGCTGATACTGCTGTTGAAAAAATTAAATCTCCAGTCC CAGAACCAGAGCCGACTACG
Downstream 100 bases:
>100_bases TCCTCTCAATTTTTTAAACATAATCTGGGTGAGTAATAGTGAGAAAAAGAAATTTGCTATTCATAGCTATACTTATTATT CTTTTTGTTGGGGGCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MPDTMPESPYRYLLEADNEEQEILFSYIENCYVSDEEKKEMKKAMKDIWKRGPDQITEQDNLMLDKVAKSTAEYLNDKYG NVGIKWSGPNMHGDIIHIACIKWGVSTSNAQTANNSAPVPDTWNSGFWQSYNHYYDPVLNTGYAPTNCANRANIAKDYYN SGQYTSAYQHLGYSSHYMADLGNPMHTGKESEQYLNQWVHTSYESYVANNWNTGYNYKNVVQNTGTYYSITNPEQSAKNL ASATRSDLNALYDAVFYYPDTFGSDSDVIEITQRVLGKTAKYNMGLVKYVRG
Sequences:
>Translated_292_residues MPDTMPESPYRYLLEADNEEQEILFSYIENCYVSDEEKKEMKKAMKDIWKRGPDQITEQDNLMLDKVAKSTAEYLNDKYG NVGIKWSGPNMHGDIIHIACIKWGVSTSNAQTANNSAPVPDTWNSGFWQSYNHYYDPVLNTGYAPTNCANRANIAKDYYN SGQYTSAYQHLGYSSHYMADLGNPMHTGKESEQYLNQWVHTSYESYVANNWNTGYNYKNVVQNTGTYYSITNPEQSAKNL ASATRSDLNALYDAVFYYPDTFGSDSDVIEITQRVLGKTAKYNMGLVKYVRG >Mature_291_residues PDTMPESPYRYLLEADNEEQEILFSYIENCYVSDEEKKEMKKAMKDIWKRGPDQITEQDNLMLDKVAKSTAEYLNDKYGN VGIKWSGPNMHGDIIHIACIKWGVSTSNAQTANNSAPVPDTWNSGFWQSYNHYYDPVLNTGYAPTNCANRANIAKDYYNS GQYTSAYQHLGYSSHYMADLGNPMHTGKESEQYLNQWVHTSYESYVANNWNTGYNYKNVVQNTGTYYSITNPEQSAKNLA SATRSDLNALYDAVFYYPDTFGSDSDVIEITQRVLGKTAKYNMGLVKYVRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33308; Mature: 33177
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTMPESPYRYLLEADNEEQEILFSYIENCYVSDEEKKEMKKAMKDIWKRGPDQITEQD CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCH NLMLDKVAKSTAEYLNDKYGNVGIKWSGPNMHGDIIHIACIKWGVSTSNAQTANNSAPVP HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC DTWNSGFWQSYNHYYDPVLNTGYAPTNCANRANIAKDYYNSGQYTSAYQHLGYSSHYMAD CCCCCCHHHCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHH LGNPMHTGKESEQYLNQWVHTSYESYVANNWNTGYNYKNVVQNTGTYYSITNPEQSAKNL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHH ASATRSDLNALYDAVFYYPDTFGSDSDVIEITQRVLGKTAKYNMGLVKYVRG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHCC >Mature Secondary Structure PDTMPESPYRYLLEADNEEQEILFSYIENCYVSDEEKKEMKKAMKDIWKRGPDQITEQD CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCH NLMLDKVAKSTAEYLNDKYGNVGIKWSGPNMHGDIIHIACIKWGVSTSNAQTANNSAPVP HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC DTWNSGFWQSYNHYYDPVLNTGYAPTNCANRANIAKDYYNSGQYTSAYQHLGYSSHYMAD CCCCCCHHHCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHH LGNPMHTGKESEQYLNQWVHTSYESYVANNWNTGYNYKNVVQNTGTYYSITNPEQSAKNL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHH ASATRSDLNALYDAVFYYPDTFGSDSDVIEITQRVLGKTAKYNMGLVKYVRG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA