Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227042

Identifier: 21227042

GI number: 21227042

Start: 1112100

End: 1113728

Strand: Direct

Name: 21227042

Synonym: MM_0940

Alternate gene names: NA

Gene position: 1112100-1113728 (Clockwise)

Preceding gene: 21227037

Following gene: 298205308

Centisome position: 27.15

GC content: 47.51

Gene sequence:

>1629_bases
ATGAGATATGGAGTTGCAGTTGACCTGGGAACAAGTGGGTATCGAGCTCAGAAGATTGACATGGATACCAGAGAAATCAA
AAGGACAGTAATAACACTGAGAAATCCTCTTCCCGGAGCGAATGTGATGGATCACATGGACTTCGCAATTCGCTACGGGC
AGGATCTTGCACATGGGCTATCGGTAAATGCGGTAAAAACCCTGCTCCAGACGCTTGATGTGCCTAGCGAGGAACTGGAC
AGAATTTCAATCTGCGGAAACCCGATTCAGTTGTCTATTTTCCAGGGAATCACTATCGAAGACCTGGCTTACGCAGGGGA
ACGGAAGAAAAAGAAGTACAACATACAGGAACAGACCAGAAACGCGAGGATAATACCCAGCAGCGAAATTTCAGGGCTTG
AAGAGTTCAACTGCGAAGTTGTAGTCCCTCCTGCCATAAAACACGAGGTAGGAGCGGATGCCCTTGCTCTCATAACCAAA
TCGGGAATGCTTGAAAGTGACGAAATATCAATTGCAACGGATTATGGGACAAATGCCGAGATGGCACTCAAAGTAAAGGA
TATCATTTATACAGGCTCGGCAGCAGCAGGTCCTGCGCTTGAAGGGCAGCAGATAAAGCACGGAACCCTTGCTTCTCCCT
TTGCAATTTCGGACTTTGAATTCGAAAACGGGGCATTGAGGAACTATGTATTGAACGAAGAGATGAAGCCCGACCCTGGG
GATCTTGTTGACCCTAAAACCGGGGAAATCCTTGAAGAAGGTAAGATTAAAGCAAAAGGGATCACAGGTACTGGAGTTAT
TGCCCTTATTGAAAAAGCCATAGGGTATGGCCTGGTTGAACTTCCGAAAGTCAAGACCCCGGACGGATTTATTCACCTGC
AGAACAATATTTCTTTCTCGGAAAGAGACCTGAAAGAAGCCGGAAAAGCTATTGGCGCTATCAGAGCAGGGCATATAACT
CTCTGTGCGGCTGCAGGCATCGAAATGACAGATATAGATGTTGCCTATATGGCAGGGGCTGCCGGAACTTACATGGACGC
TGAAAAAGCCCAGAAAATTGGATTAATCCCTTACTCGACAGGAAAAATTGCTCAGCTCGGAAATACTTCACTTGCAGTTG
CAAGGGAGACCCTGCTTTCAGAGGAGAGGCTCTGGGAGCTTCAGGACATTGCAAGCCAGATAATAGGCACTCATATAATG
TTTGCGACTGTTCCGGAATTCAGGGATGCATATGTCCTTGAACTTGCGTACTGGGAAGAGGGGATGCCCTTCAAGATGTT
TAAGAAATACCTTAAAAAGAAGGGGCTTCCGTCACTCGATGACCCTATAAGCAACCCTGTGGTCGATAAGCGCGTGGAAA
GAGATATCCCTGTGCTTGGAGAGGAGGGCCTGTACGTACTGGAAAGGGTAGGGACCTATATGACCATGGTAGTCTCTGAC
TGCCCCGAGTGCAGGAAGTGCATAAAGGTCTGCCCCAACGATGCCATTTCAATTGACGAAGAAAACAGGGTTATGATAAG
CACTGACCTCTGTGAAGGTGCACACTGTCAGAAATGCATTAGAGCCTGCCCTCCGGACAAATTCGACTGGAAGAACCTGG
AAGTTTTCAAACCCCCACAGCAGGAGTAA

Upstream 100 bases:

>100_bases
TTATTTATACGTCATTTTTCAAAGTAATATTACACAAAATCTCAAACGGCTTAAGTGATATGTCAAAAACCCGGAAAAAT
AAAAAGATGAGGGGATCTAT

Downstream 100 bases:

>100_bases
GCCAAATCTGGTTACTACTGAACCGGCACTTTAATACTGATCGTGCAGGAAGACATAAGTTTAAAATAAATATTTAATGA
GAGTTGAAGCTGAGAGACGC

Product: putative flavoprotein

Products: NA

Alternate protein names: Flavoprotein; Vitamin; Corrinoid Activation/Regeneration Protein; Methyltransferase Activation Protein MapA; Methylamine Methyltransferase Corrinoid Activation Protein

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MRYGVAVDLGTSGYRAQKIDMDTREIKRTVITLRNPLPGANVMDHMDFAIRYGQDLAHGLSVNAVKTLLQTLDVPSEELD
RISICGNPIQLSIFQGITIEDLAYAGERKKKKYNIQEQTRNARIIPSSEISGLEEFNCEVVVPPAIKHEVGADALALITK
SGMLESDEISIATDYGTNAEMALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFENGALRNYVLNEEMKPDPG
DLVDPKTGEILEEGKIKAKGITGTGVIALIEKAIGYGLVELPKVKTPDGFIHLQNNISFSERDLKEAGKAIGAIRAGHIT
LCAAAGIEMTDIDVAYMAGAAGTYMDAEKAQKIGLIPYSTGKIAQLGNTSLAVARETLLSEERLWELQDIASQIIGTHIM
FATVPEFRDAYVLELAYWEEGMPFKMFKKYLKKKGLPSLDDPISNPVVDKRVERDIPVLGEEGLYVLERVGTYMTMVVSD
CPECRKCIKVCPNDAISIDEENRVMISTDLCEGAHCQKCIRACPPDKFDWKNLEVFKPPQQE

Sequences:

>Translated_542_residues
MRYGVAVDLGTSGYRAQKIDMDTREIKRTVITLRNPLPGANVMDHMDFAIRYGQDLAHGLSVNAVKTLLQTLDVPSEELD
RISICGNPIQLSIFQGITIEDLAYAGERKKKKYNIQEQTRNARIIPSSEISGLEEFNCEVVVPPAIKHEVGADALALITK
SGMLESDEISIATDYGTNAEMALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFENGALRNYVLNEEMKPDPG
DLVDPKTGEILEEGKIKAKGITGTGVIALIEKAIGYGLVELPKVKTPDGFIHLQNNISFSERDLKEAGKAIGAIRAGHIT
LCAAAGIEMTDIDVAYMAGAAGTYMDAEKAQKIGLIPYSTGKIAQLGNTSLAVARETLLSEERLWELQDIASQIIGTHIM
FATVPEFRDAYVLELAYWEEGMPFKMFKKYLKKKGLPSLDDPISNPVVDKRVERDIPVLGEEGLYVLERVGTYMTMVVSD
CPECRKCIKVCPNDAISIDEENRVMISTDLCEGAHCQKCIRACPPDKFDWKNLEVFKPPQQE
>Mature_542_residues
MRYGVAVDLGTSGYRAQKIDMDTREIKRTVITLRNPLPGANVMDHMDFAIRYGQDLAHGLSVNAVKTLLQTLDVPSEELD
RISICGNPIQLSIFQGITIEDLAYAGERKKKKYNIQEQTRNARIIPSSEISGLEEFNCEVVVPPAIKHEVGADALALITK
SGMLESDEISIATDYGTNAEMALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFENGALRNYVLNEEMKPDPG
DLVDPKTGEILEEGKIKAKGITGTGVIALIEKAIGYGLVELPKVKTPDGFIHLQNNISFSERDLKEAGKAIGAIRAGHIT
LCAAAGIEMTDIDVAYMAGAAGTYMDAEKAQKIGLIPYSTGKIAQLGNTSLAVARETLLSEERLWELQDIASQIIGTHIM
FATVPEFRDAYVLELAYWEEGMPFKMFKKYLKKKGLPSLDDPISNPVVDKRVERDIPVLGEEGLYVLERVGTYMTMVVSD
CPECRKCIKVCPNDAISIDEENRVMISTDLCEGAHCQKCIRACPPDKFDWKNLEVFKPPQQE

Specific function: Unknown

COG id: COG3894

COG function: function code R; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59509; Mature: 59509

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGVAVDLGTSGYRAQKIDMDTREIKRTVITLRNPLPGANVMDHMDFAIRYGQDLAHGL
CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHCC
SVNAVKTLLQTLDVPSEELDRISICGNPIQLSIFQGITIEDLAYAGERKKKKYNIQEQTR
CHHHHHHHHHHHCCCHHHHCEEEECCCCEEEEEECCCCHHHHHHHCHHHHHCCCHHHHCC
NARIIPSSEISGLEEFNCEVVVPPAIKHEVGADALALITKSGMLESDEISIATDYGTNAE
CCEECCCHHHCCHHHCCCEEEECCHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCCCCE
MALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFENGALRNYVLNEEMKPDPG
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHEEECCCCCCCCC
DLVDPKTGEILEEGKIKAKGITGTGVIALIEKAIGYGLVELPKVKTPDGFIHLQNNISFS
CCCCCCCCCHHHCCCEEECCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCCC
ERDLKEAGKAIGAIRAGHITLCAAAGIEMTDIDVAYMAGAAGTYMDAEKAQKIGLIPYST
HHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHCCCCCCCCCHHHHHHCCEEECCC
GKIAQLGNTSLAVARETLLSEERLWELQDIASQIIGTHIMFATVPEFRDAYVLELAYWEE
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCC
GMPFKMFKKYLKKKGLPSLDDPISNPVVDKRVERDIPVLGEEGLYVLERVGTYMTMVVSD
CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
CPECRKCIKVCPNDAISIDEENRVMISTDLCEGAHCQKCIRACPPDKFDWKNLEVFKPPQ
CHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCC
QE
CC
>Mature Secondary Structure
MRYGVAVDLGTSGYRAQKIDMDTREIKRTVITLRNPLPGANVMDHMDFAIRYGQDLAHGL
CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHCC
SVNAVKTLLQTLDVPSEELDRISICGNPIQLSIFQGITIEDLAYAGERKKKKYNIQEQTR
CHHHHHHHHHHHCCCHHHHCEEEECCCCEEEEEECCCCHHHHHHHCHHHHHCCCHHHHCC
NARIIPSSEISGLEEFNCEVVVPPAIKHEVGADALALITKSGMLESDEISIATDYGTNAE
CCEECCCHHHCCHHHCCCEEEECCHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCCCCE
MALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFENGALRNYVLNEEMKPDPG
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHEEECCCCCCCCC
DLVDPKTGEILEEGKIKAKGITGTGVIALIEKAIGYGLVELPKVKTPDGFIHLQNNISFS
CCCCCCCCCHHHCCCEEECCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCCC
ERDLKEAGKAIGAIRAGHITLCAAAGIEMTDIDVAYMAGAAGTYMDAEKAQKIGLIPYST
HHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHCCCCCCCCCHHHHHHCCEEECCC
GKIAQLGNTSLAVARETLLSEERLWELQDIASQIIGTHIMFATVPEFRDAYVLELAYWEE
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCC
GMPFKMFKKYLKKKGLPSLDDPISNPVVDKRVERDIPVLGEEGLYVLERVGTYMTMVVSD
CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
CPECRKCIKVCPNDAISIDEENRVMISTDLCEGAHCQKCIRACPPDKFDWKNLEVFKPPQ
CHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCC
QE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA