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The map label for this gene is rpl40e [H]

Identifier: 298205308

GI number: 298205308

Start: 1116966

End: 1117115

Strand: Direct

Name: rpl40e [H]

Synonym: NA

Alternate gene names: 298205308

Gene position: 1116966-1117115 (Clockwise)

Preceding gene: 21227042

Following gene: 21227045

Centisome position: 27.27

GC content: 46.67

Gene sequence:

>150_bases
ATGGGTCGTTTTCCAGAAGCAGAAGAAAGATTGTTAAACAAGAAAATCTGCATGAAGTGTAATGCCAGAAACGCTACAAG
GGCAACCCGCTGCAGAAAGTGCGGTTCCAGCGCTCTTCGCGTAAAATCCAAGGAATCCAAGGGAGCATGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: 50S ribosomal protein L40E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 48

Protein sequence:
NA

Sequences:

>Translated_49_residues
MGRFPEAEERLLNKKICMKCNARNATRATRCRKCGSSALRVKSKESKGA
>Mature_48_residues
GRFPEAEERLLNKKICMKCNARNATRATRCRKCGSSALRVKSKESKGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L40e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001975 [H]

Pfam domain/function: PF01020 Ribosomal_L40e [H]

EC number: NA

Molecular weight: Translated: 5487; Mature: 5355

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
8.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFPEAEERLLNKKICMKCNARNATRATRCRKCGSSALRVKSKESKGA
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
GRFPEAEERLLNKKICMKCNARNATRATRCRKCGSSALRVKSKESKGA
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]