The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227039

Identifier: 21227039

GI number: 21227039

Start: 1105539

End: 1107488

Strand: Reverse

Name: 21227039

Synonym: MM_0937

Alternate gene names: NA

Gene position: 1107488-1105539 (Counterclockwise)

Preceding gene: 21227040

Following gene: 21227038

Centisome position: 27.04

GC content: 46.05

Gene sequence:

>1950_bases
ATGAACGCTATAAATACCCTGGCATTCAGGATTTTCGGAGAAAAAATTCTTGAAAAAGAAGATAAGTTTGCCCTTCTCAG
GATAAAGCTTCGTCAGGCCCAAATTCCCTTGCCTGTGGAGCAGTATGTTTCAACCGCAATTTTATTTTCCCTGCTTGCGG
GAATTTTTGGAGGGCTTGCAGGCTTGCTTCTCGGGAGTCAACTTTTCCGGGGAATTACTCCGGAAAGCATTGTTTCAATG
TTCGGCATCTCGAACAGGGTAACCCGGGCGGTTGAGACTCCTGCATTTATCGAATCTCATCTCCCTTTTATCCTTACGGT
TATAGGGGGAATCATTCTCTTTTCTATGATTTCTGCCCTTACTTACGGGCTTATCATGGCATACCCGCCCATGAAGGCTG
ACAGCAGGAAGCGCGCTATCAACGCATCAATGCCTCATGCAACAGCTTTTCTCTATGTCCTGCAGAGAGGCGGAGGCATG
ACCATCTATGATATCATGAAGTCGCTTTCGAAGCATTCCCATCTTTACGGGACCACCGCCCGTGAATTCGGGAATATTGT
CAGGGATATAGAGTACTTTGGAAAAGACCTTCAGGATTCTCTCTGGGACTCTGCTGACAGGACGCCTTCTGAGCAGTTCA
AAGACCTTGTAGACGGTCTGATTTCTATAGTTTCAAGCGGAGGAGACATTACTCTTTACCTGAAAAACAAGACTGACCTT
TATAAATCGAATGCAAATAAGGAACACAAACGTTTCCTTGAAACCCTCGGTCTCCTGGCAGAGGTTTATATTACGGTGTT
CGTTGTAGGTCCCCTTTTCCTTATGGTTATCCTCGTTGTTATGAATATGATCGATAACGGGGGCCCAACCCAGCTCTATG
TCCTTGTATACGGTGCAATTCCTTTCGGGACCATGATTTTCCTTGTCTTTCTGGATATGCTTACAGGAGATGCGGAAAAG
ATGCCTGAAGAGCAAATCTCTGCAATCAGGCCGGATTCTTTCAGCGACGTCAGGGTAAAACCGTTAACCGAAGTTGATGA
AGAGCTACTTCAGAAAATGGAGTTCTTTGAAAAGGTCTCCAGAGTCAAAAGAGTTCTCCTGCATCCCATAAGGGCTATGA
TTGACAGACCTGTATATGCTTTCGTGGTGAGCGCTCCGGTCGCCCTGGGATATTTTGTTTCTGCTTACATGGAACACGGG
CCTTACTATGGAGGTTTTGTCGAGACAGCATCCACTCTTGACGACTATCTCTATGCAACTCTTCTTATTCTTTTCATTCC
TTACATAATCTTCCACGAACTTGAAGTCCGCAGGATAAGGCAGATTGAGGACCAGGTTCCTGAATTCCTTAAAAGGCTTG
CAAGTATCAACGGTACAGGAATTCTGCTTGCCGATGCCATTGCCATTACAGCCCAGTCAAATATGGGCAGGCTTAAATCC
GAAATTAAACGTACGGTTGCGGATATCCGCTGGAATTCAAACCTTGTAGACGCTATGAAGCGTTTTGAAGCCAGGATCCG
GACCAACATGACCAGACGTAGCCTGAGCCTTATTGCCAAAGCAAGCGAGTCCACAGGAGATATACATCAGGTTATCAGCA
CGGTTGCGGATGATGCAGATATCGAGAAAAACCTCAAGAAAGAGCGTTCTGCAGAGATGTTTATCTATGTCTTTATCATC
TTTGTGACGTTCTTTGTTTTTCTGGTGATAGTATACGTGCTTGCTGCGTTCTTCCTGCCTGCACTTGACGGTTCGAGTAA
CCCAGCAATGTCCATGGGAGGTTTTGACCTGAAGGAATACACCCTTCTCTTCTTCCATGCAGCTCTCCTGCAGGGTTTCG
GCTCAGGGCTGGTTGCAGGTAAAATGGGCTCGGGAAACATTTCCTCAGGGATCAAGCACTCCCTTGCGATGATGTCGCTG
TCTTATGTGCTGTTCGTTATGTTTATCTGA

Upstream 100 bases:

>100_bases
AGTACATATGTATGCTACAAATCCGCAGCTTGTAATGGAAGCGGTTGGAAACGATACCCTGCGGGATATGGTAGCACATC
ACAGTTAATCGGGGGTATCC

Downstream 100 bases:

>100_bases
GTCCTGGGTTTGAGGTTAAGCCTTCGAGATTTTTCCGGAGGCTTACCTGAATTTTTATCCAATTTTTACCTGCTTTTTAA
CCCATTCCTTTTTAATATCT

Product: putative flagella-like protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MNAINTLAFRIFGEKILEKEDKFALLRIKLRQAQIPLPVEQYVSTAILFSLLAGIFGGLAGLLLGSQLFRGITPESIVSM
FGISNRVTRAVETPAFIESHLPFILTVIGGIILFSMISALTYGLIMAYPPMKADSRKRAINASMPHATAFLYVLQRGGGM
TIYDIMKSLSKHSHLYGTTAREFGNIVRDIEYFGKDLQDSLWDSADRTPSEQFKDLVDGLISIVSSGGDITLYLKNKTDL
YKSNANKEHKRFLETLGLLAEVYITVFVVGPLFLMVILVVMNMIDNGGPTQLYVLVYGAIPFGTMIFLVFLDMLTGDAEK
MPEEQISAIRPDSFSDVRVKPLTEVDEELLQKMEFFEKVSRVKRVLLHPIRAMIDRPVYAFVVSAPVALGYFVSAYMEHG
PYYGGFVETASTLDDYLYATLLILFIPYIIFHELEVRRIRQIEDQVPEFLKRLASINGTGILLADAIAITAQSNMGRLKS
EIKRTVADIRWNSNLVDAMKRFEARIRTNMTRRSLSLIAKASESTGDIHQVISTVADDADIEKNLKKERSAEMFIYVFII
FVTFFVFLVIVYVLAAFFLPALDGSSNPAMSMGGFDLKEYTLLFFHAALLQGFGSGLVAGKMGSGNISSGIKHSLAMMSL
SYVLFVMFI

Sequences:

>Translated_649_residues
MNAINTLAFRIFGEKILEKEDKFALLRIKLRQAQIPLPVEQYVSTAILFSLLAGIFGGLAGLLLGSQLFRGITPESIVSM
FGISNRVTRAVETPAFIESHLPFILTVIGGIILFSMISALTYGLIMAYPPMKADSRKRAINASMPHATAFLYVLQRGGGM
TIYDIMKSLSKHSHLYGTTAREFGNIVRDIEYFGKDLQDSLWDSADRTPSEQFKDLVDGLISIVSSGGDITLYLKNKTDL
YKSNANKEHKRFLETLGLLAEVYITVFVVGPLFLMVILVVMNMIDNGGPTQLYVLVYGAIPFGTMIFLVFLDMLTGDAEK
MPEEQISAIRPDSFSDVRVKPLTEVDEELLQKMEFFEKVSRVKRVLLHPIRAMIDRPVYAFVVSAPVALGYFVSAYMEHG
PYYGGFVETASTLDDYLYATLLILFIPYIIFHELEVRRIRQIEDQVPEFLKRLASINGTGILLADAIAITAQSNMGRLKS
EIKRTVADIRWNSNLVDAMKRFEARIRTNMTRRSLSLIAKASESTGDIHQVISTVADDADIEKNLKKERSAEMFIYVFII
FVTFFVFLVIVYVLAAFFLPALDGSSNPAMSMGGFDLKEYTLLFFHAALLQGFGSGLVAGKMGSGNISSGIKHSLAMMSL
SYVLFVMFI
>Mature_649_residues
MNAINTLAFRIFGEKILEKEDKFALLRIKLRQAQIPLPVEQYVSTAILFSLLAGIFGGLAGLLLGSQLFRGITPESIVSM
FGISNRVTRAVETPAFIESHLPFILTVIGGIILFSMISALTYGLIMAYPPMKADSRKRAINASMPHATAFLYVLQRGGGM
TIYDIMKSLSKHSHLYGTTAREFGNIVRDIEYFGKDLQDSLWDSADRTPSEQFKDLVDGLISIVSSGGDITLYLKNKTDL
YKSNANKEHKRFLETLGLLAEVYITVFVVGPLFLMVILVVMNMIDNGGPTQLYVLVYGAIPFGTMIFLVFLDMLTGDAEK
MPEEQISAIRPDSFSDVRVKPLTEVDEELLQKMEFFEKVSRVKRVLLHPIRAMIDRPVYAFVVSAPVALGYFVSAYMEHG
PYYGGFVETASTLDDYLYATLLILFIPYIIFHELEVRRIRQIEDQVPEFLKRLASINGTGILLADAIAITAQSNMGRLKS
EIKRTVADIRWNSNLVDAMKRFEARIRTNMTRRSLSLIAKASESTGDIHQVISTVADDADIEKNLKKERSAEMFIYVFII
FVTFFVFLVIVYVLAAFFLPALDGSSNPAMSMGGFDLKEYTLLFFHAALLQGFGSGLVAGKMGSGNISSGIKHSLAMMSL
SYVLFVMFI

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaJ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 72403; Mature: 72403

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAINTLAFRIFGEKILEKEDKFALLRIKLRQAQIPLPVEQYVSTAILFSLLAGIFGGLA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLLGSQLFRGITPESIVSMFGISNRVTRAVETPAFIESHLPFILTVIGGIILFSMISAL
HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYGLIMAYPPMKADSRKRAINASMPHATAFLYVLQRGGGMTIYDIMKSLSKHSHLYGTTA
HHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCCHH
REFGNIVRDIEYFGKDLQDSLWDSADRTPSEQFKDLVDGLISIVSSGGDITLYLKNKTDL
HHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
YKSNANKEHKRFLETLGLLAEVYITVFVVGPLFLMVILVVMNMIDNGGPTQLYVLVYGAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHH
PFGTMIFLVFLDMLTGDAEKMPEEQISAIRPDSFSDVRVKPLTEVDEELLQKMEFFEKVS
HHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RVKRVLLHPIRAMIDRPVYAFVVSAPVALGYFVSAYMEHGPYYGGFVETASTLDDYLYAT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LLILFIPYIIFHELEVRRIRQIEDQVPEFLKRLASINGTGILLADAIAITAQSNMGRLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH
EIKRTVADIRWNSNLVDAMKRFEARIRTNMTRRSLSLIAKASESTGDIHQVISTVADDAD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
IEKNLKKERSAEMFIYVFIIFVTFFVFLVIVYVLAAFFLPALDGSSNPAMSMGGFDLKEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TLLFFHAALLQGFGSGLVAGKMGSGNISSGIKHSLAMMSLSYVLFVMFI
HHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNAINTLAFRIFGEKILEKEDKFALLRIKLRQAQIPLPVEQYVSTAILFSLLAGIFGGLA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLLGSQLFRGITPESIVSMFGISNRVTRAVETPAFIESHLPFILTVIGGIILFSMISAL
HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYGLIMAYPPMKADSRKRAINASMPHATAFLYVLQRGGGMTIYDIMKSLSKHSHLYGTTA
HHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCCHH
REFGNIVRDIEYFGKDLQDSLWDSADRTPSEQFKDLVDGLISIVSSGGDITLYLKNKTDL
HHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
YKSNANKEHKRFLETLGLLAEVYITVFVVGPLFLMVILVVMNMIDNGGPTQLYVLVYGAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHH
PFGTMIFLVFLDMLTGDAEKMPEEQISAIRPDSFSDVRVKPLTEVDEELLQKMEFFEKVS
HHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RVKRVLLHPIRAMIDRPVYAFVVSAPVALGYFVSAYMEHGPYYGGFVETASTLDDYLYAT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LLILFIPYIIFHELEVRRIRQIEDQVPEFLKRLASINGTGILLADAIAITAQSNMGRLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH
EIKRTVADIRWNSNLVDAMKRFEARIRTNMTRRSLSLIAKASESTGDIHQVISTVADDAD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
IEKNLKKERSAEMFIYVFIIFVTFFVFLVIVYVLAAFFLPALDGSSNPAMSMGGFDLKEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TLLFFHAALLQGFGSGLVAGKMGSGNISSGIKHSLAMMSLSYVLFVMFI
HHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]