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The map label for this gene is hofB [C]

Identifier: 21227040

GI number: 21227040

Start: 1107501

End: 1109198

Strand: Reverse

Name: hofB [C]

Synonym: MM_0938

Alternate gene names: 21227040

Gene position: 1109198-1107501 (Counterclockwise)

Preceding gene: 21227041

Following gene: 21227039

Centisome position: 27.08

GC content: 43.4

Gene sequence:

>1698_bases
ATGAAAGGTCTTACCCGGGACATAATGGGGATTAAAGAAGGCGAAAAATTAAGTGATAAGCTCAAAGAGTTCTTTGAGGA
AGTAAAAACCCCTGAGGGGGCAAAAAAGAAATTTGAAGAAATAATCCGGAATTTGAAGGACGAGGAAATAAGGGTTCTTC
CGCCTTATGATCCGGAAACCTGCGGCCCTCTTCTTGAATATGAAATTCCTGCGGGATTTACTGAAATCGAACGCTACTGG
GTAGAAGAGCCTTACGCTTTTGTCAGCATAATAGAAAACAGGGAAATGAAATACTATTATGTTATTGAGCCTACTCTAAC
CGTCTATGAAAAAACTGTTCTTGAAAGGGTCAGAAATAATCTTGAAGACGTTCTTACTCAGGAGGACATGATAACCGGAA
AAGAAAAAGACGTCGTCCTCATTAACAGGTCTATGCGGCTTTTTGATCAATATTACAGTACCCTTGAAGTTTCCTCCATT
CATAAAATAATGTATTTCCTGAGAAGAAATTTCATTGGATATGAAAGGATAAACCCGCTGATTCATGACCCGAACATAGA
AGATATTTCCTGTTCCGGTATCGAAATCCCTATTTATCTTTACCATAGAAAGCACAACAACATCGTGACCAATATCCATT
TTGGGGAGAAAGAACTGGATTCCCTTGTTGTCAAGCTCTGCCAGAGGAGCGGCAAGCACATCTCCATAGGAGAACCAATC
GTAGATGCGACTCTTCCTGACGGGTCAAGAATTCAGGCAACCCTCGGAAAAGAAGTTACTACAAGGGGAAGTTCTTACAC
AATCCGTAAGTTTAAAGGAGATCCGATAACTCCTGTTGACCTGATGCGGTACGGCACATGCAGTGTCGAAATGATGGCTT
ACTACTGGATTGCAATTGAAAACAACATCAGTGTGCTTTTTGCTGGGGGCACGGCCTCAGGTAAAACTTCTCTTATGAAT
GCTATTTCTCTTTTTATTCCAAGGCTGTCAAAAGTGGTGTCCATTGAAGACACAAGGGAAATAATGCTCTACCATGAAAA
CTGGATTGCAGGAGCAACCAGGAAATCGTTCACAGTTGGAGGTACTGGCGAAGTTTCAATGTATGAGCTCCTGAAAGCTG
CTCTCAGGCAGCGTCCTGAGTATATCCTGGTGGGCGAAGTACGTGGTAAAGAGGCTCTTACCCTTTTCCAGGCAATGTCG
ACAGGCCACACCACCTATTCAACAATGCATGCAAGCGATGTGCAGACTGTAGTTAACAGGCTTGAGAACGAGCCTATCAA
CGTACCTCATGTAATGATGCAGGCCCTTGGTATCATCTGCATTCAGATGCAGACCTATGTCAATGAGACCAGAGTTAGGA
GAACCAAAACAATAGTGGAGATCACAGGACTTGACGCAAGGTCAGGAAGTCTGAGGATCAATGAACTCTACCGCTGGGAG
CCGGTGCACGATAACTTCAAGCGGGCAGGCGATTCCTATGTGCTTAATGAGATTATGAGAGCAAGAGGATGGAGCCCTGA
TAAACTCTTTATTGAATTTAAAAACCGGGAGCAAATCCTTGCCTATATGACAGCAAAACAGATCCGTGATTACGTGAGCG
TTTCCCTTATAGTACATATGTATGCTACAAATCCGCAGCTTGTAATGGAAGCGGTTGGAAACGATACCCTGCGGGATATG
GTAGCACATCACAGTTAA

Upstream 100 bases:

>100_bases
TCATGAAACAAAAATAGAGAAAAAAGTCCGAACTTCAGGTAAATCCAAAAAAGCTGTCCGGAAGGCAAAAATCAAGAAAA
AACCCGGATTCGCCGAAAAT

Downstream 100 bases:

>100_bases
TCGGGGGTATCCATGAACGCTATAAATACCCTGGCATTCAGGATTTTCGGAGAAAAAATTCTTGAAAAAGAAGATAAGTT
TGCCCTTCTCAGGATAAAGC

Product: putative flagella-like protein FlaI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKGLTRDIMGIKEGEKLSDKLKEFFEEVKTPEGAKKKFEEIIRNLKDEEIRVLPPYDPETCGPLLEYEIPAGFTEIERYW
VEEPYAFVSIIENREMKYYYVIEPTLTVYEKTVLERVRNNLEDVLTQEDMITGKEKDVVLINRSMRLFDQYYSTLEVSSI
HKIMYFLRRNFIGYERINPLIHDPNIEDISCSGIEIPIYLYHRKHNNIVTNIHFGEKELDSLVVKLCQRSGKHISIGEPI
VDATLPDGSRIQATLGKEVTTRGSSYTIRKFKGDPITPVDLMRYGTCSVEMMAYYWIAIENNISVLFAGGTASGKTSLMN
AISLFIPRLSKVVSIEDTREIMLYHENWIAGATRKSFTVGGTGEVSMYELLKAALRQRPEYILVGEVRGKEALTLFQAMS
TGHTTYSTMHASDVQTVVNRLENEPINVPHVMMQALGIICIQMQTYVNETRVRRTKTIVEITGLDARSGSLRINELYRWE
PVHDNFKRAGDSYVLNEIMRARGWSPDKLFIEFKNREQILAYMTAKQIRDYVSVSLIVHMYATNPQLVMEAVGNDTLRDM
VAHHS

Sequences:

>Translated_565_residues
MKGLTRDIMGIKEGEKLSDKLKEFFEEVKTPEGAKKKFEEIIRNLKDEEIRVLPPYDPETCGPLLEYEIPAGFTEIERYW
VEEPYAFVSIIENREMKYYYVIEPTLTVYEKTVLERVRNNLEDVLTQEDMITGKEKDVVLINRSMRLFDQYYSTLEVSSI
HKIMYFLRRNFIGYERINPLIHDPNIEDISCSGIEIPIYLYHRKHNNIVTNIHFGEKELDSLVVKLCQRSGKHISIGEPI
VDATLPDGSRIQATLGKEVTTRGSSYTIRKFKGDPITPVDLMRYGTCSVEMMAYYWIAIENNISVLFAGGTASGKTSLMN
AISLFIPRLSKVVSIEDTREIMLYHENWIAGATRKSFTVGGTGEVSMYELLKAALRQRPEYILVGEVRGKEALTLFQAMS
TGHTTYSTMHASDVQTVVNRLENEPINVPHVMMQALGIICIQMQTYVNETRVRRTKTIVEITGLDARSGSLRINELYRWE
PVHDNFKRAGDSYVLNEIMRARGWSPDKLFIEFKNREQILAYMTAKQIRDYVSVSLIVHMYATNPQLVMEAVGNDTLRDM
VAHHS
>Mature_565_residues
MKGLTRDIMGIKEGEKLSDKLKEFFEEVKTPEGAKKKFEEIIRNLKDEEIRVLPPYDPETCGPLLEYEIPAGFTEIERYW
VEEPYAFVSIIENREMKYYYVIEPTLTVYEKTVLERVRNNLEDVLTQEDMITGKEKDVVLINRSMRLFDQYYSTLEVSSI
HKIMYFLRRNFIGYERINPLIHDPNIEDISCSGIEIPIYLYHRKHNNIVTNIHFGEKELDSLVVKLCQRSGKHISIGEPI
VDATLPDGSRIQATLGKEVTTRGSSYTIRKFKGDPITPVDLMRYGTCSVEMMAYYWIAIENNISVLFAGGTASGKTSLMN
AISLFIPRLSKVVSIEDTREIMLYHENWIAGATRKSFTVGGTGEVSMYELLKAALRQRPEYILVGEVRGKEALTLFQAMS
TGHTTYSTMHASDVQTVVNRLENEPINVPHVMMQALGIICIQMQTYVNETRVRRTKTIVEITGLDARSGSLRINELYRWE
PVHDNFKRAGDSYVLNEIMRARGWSPDKLFIEFKNREQILAYMTAKQIRDYVSVSLIVHMYATNPQLVMEAVGNDTLRDM
VAHHS

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 64957; Mature: 64957

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLTRDIMGIKEGEKLSDKLKEFFEEVKTPEGAKKKFEEIIRNLKDEEIRVLPPYDPET
CCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCC
CGPLLEYEIPAGFTEIERYWVEEPYAFVSIIENREMKYYYVIEPTLTVYEKTVLERVRNN
CCCCEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHH
LEDVLTQEDMITGKEKDVVLINRSMRLFDQYYSTLEVSSIHKIMYFLRRNFIGYERINPL
HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
IHDPNIEDISCSGIEIPIYLYHRKHNNIVTNIHFGEKELDSLVVKLCQRSGKHISIGEPI
CCCCCCCCEECCCEEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCE
VDATLPDGSRIQATLGKEVTTRGSSYTIRKFKGDPITPVDLMRYGTCSVEMMAYYWIAIE
EECCCCCCCEEEEECCCHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEE
NNISVLFAGGTASGKTSLMNAISLFIPRLSKVVSIEDTREIMLYHENWIAGATRKSFTVG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCEECCCCCCEEEEC
GTGEVSMYELLKAALRQRPEYILVGEVRGKEALTLFQAMSTGHTTYSTMHASDVQTVVNR
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHH
LENEPINVPHVMMQALGIICIQMQTYVNETRVRRTKTIVEITGLDARSGSLRINELYRWE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEHEEECC
PVHDNFKRAGDSYVLNEIMRARGWSPDKLFIEFKNREQILAYMTAKQIRDYVSVSLIVHM
CCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEE
YATNPQLVMEAVGNDTLRDMVAHHS
ECCCHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MKGLTRDIMGIKEGEKLSDKLKEFFEEVKTPEGAKKKFEEIIRNLKDEEIRVLPPYDPET
CCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCC
CGPLLEYEIPAGFTEIERYWVEEPYAFVSIIENREMKYYYVIEPTLTVYEKTVLERVRNN
CCCCEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHH
LEDVLTQEDMITGKEKDVVLINRSMRLFDQYYSTLEVSSIHKIMYFLRRNFIGYERINPL
HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
IHDPNIEDISCSGIEIPIYLYHRKHNNIVTNIHFGEKELDSLVVKLCQRSGKHISIGEPI
CCCCCCCCEECCCEEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCE
VDATLPDGSRIQATLGKEVTTRGSSYTIRKFKGDPITPVDLMRYGTCSVEMMAYYWIAIE
EECCCCCCCEEEEECCCHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEE
NNISVLFAGGTASGKTSLMNAISLFIPRLSKVVSIEDTREIMLYHENWIAGATRKSFTVG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCEECCCCCCEEEEC
GTGEVSMYELLKAALRQRPEYILVGEVRGKEALTLFQAMSTGHTTYSTMHASDVQTVVNR
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHH
LENEPINVPHVMMQALGIICIQMQTYVNETRVRRTKTIVEITGLDARSGSLRINELYRWE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEHEEECC
PVHDNFKRAGDSYVLNEIMRARGWSPDKLFIEFKNREQILAYMTAKQIRDYVSVSLIVHM
CCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEE
YATNPQLVMEAVGNDTLRDMVAHHS
ECCCHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]