Click here to switch to the map view.

The map label for this gene is 21227028

Identifier: 21227028

GI number: 21227028

Start: 1091936

End: 1093564

Strand: Reverse

Name: 21227028

Synonym: MM_0926

Alternate gene names: NA

Gene position: 1093564-1091936 (Counterclockwise)

Preceding gene: 21227029

Following gene: 21227027

Centisome position: 26.7

GC content: 36.83

Gene sequence:

>1629_bases
ATGGCAGAGAAAAACAGCAGTAGAAGAGTCGAATCCTCCTTAAAACGTACAAGGTTCTTAGGTCACCTCGGTCTTATGGC
TGGAGTTTTCCGAGAACTTGAAGTTGACAAACTGATCGATGAGAAACTTCCTAAAGAACGGAATCATAATGTTCCTCACT
CAGTCTGCATCCTTGCCATGGTACTCAATGGCCTTGGTTTTATAGGGCAACGTCTGTACCTGTTTCCTGATTTTTTCAAA
AACGTTTCTACTGAAAGGCTCTTTGGAGACGGTATAATAAAAGAAGACCTGAATCAATATGCTATCGGAGAGACTCTTGA
CAGAATCGTAAAATATGGCCCTACAAAACTGTTTACGGAAATTGCTCTTCACATTATGGCTCGTCTACCTATTCCTGTCC
ACTGTTTACACGCTGACACTACAAGTGTCAGCGTTTTTGGTGATTATGACGACGAAGAAACTGAGTCTATTGATATTACT
TTTGGAATTCCTAAAAACGGACGATGGGATCTCAAACAATTTGTGTTGAGCTTGATTGTTAATCAACATGGGATACCTCT
TTTCATGAATACACATTCAGGAAATGCTTCAGACAAAAACACAATTCTGGAAGCAATAACGTCTCTCAAATCAGTTTTAA
GACCTGAAAGCAAAGTTTACTATGTCGCTGATAGTTCCTTTTATACAGACAATAATATCCAGAACATAGGGACGTCTTTC
TGGATAAGTCGTGTTCCTGCAACAATTACCGAGGCAAAGGAACTGCTAGCTGCAAATCTGAACCTGCAAAAGCTAAAAAG
TGATGAGAGGTACTCATTCTATCAAACCTTTGTGGAATATGGCGGAATCAAACAAAAGTGGGTTTTGTTGCTTTCTCACA
AGATGAAAGAGAAGAAAGAGGGAACTTTCAGGACGAAGCTTGACAAAGAGGTAGAAAAAGCAGAGAAGTCTTTTAAAAAG
CTGAAAGTAGAGGACTTCTTCTGCGAAGAGGATGCATTAAAAGCCGCAGAGAAATGGATTCAAGATTTTCCTTCTGTTTC
ATTTGAAAAGGTAGATGTGAAATCCATTAAAAAACGTGAATCGGGTAAAAAAGGCAGACCTTCAAAAGATGAAGAATTAA
AGACTTATTTCAGGATTGATGGCATCATAAAGGTTAATGATGCTTTTGTTTTGAAAGAAATGGAGAAAATGGGACTTTTC
ATTCTTGCAAGTAATGATATCAGTCTTTCTCCTGAAGAGATGCTGAAGTATTACAAAGGACAGGACAATGTAGAAAAAGG
ATTCAGATTCTTGAAAAGTGATACATTTAGCATATCGAAAGTCTACCTCAAGAAGAAAGGAAGAATTGAAGCATTAACCA
TGATAATGGTTCTATGCTTAATGATTTATTCTATTGCAGAATGGAAACTGAGAATTAAATTAGAAACAGAAAATGAAACG
GTGCCAGATCAAAAAGGGAAACCAACAAAAAGACCTACAATGAGATGGATATTTTTCAAGTTCCAAGGAATTACAGAACT
TATTTCTCAGAAAAAAGGAAAAATGAAGTCAGAAATATTGAATATGGAGGAGATTCACTGGAAGATATTGAGTCTAATGG
GAGAGAAATATGAAAATATATATCTCTAA

Upstream 100 bases:

>100_bases
TTTTTTCTGTATTTTTTCCGATTTTTTTATAAAACCTGCTTTCGGCAGGTAAACCTATAAATTAATATCATTAATTTTAT
ATCTCTCTCTTGGTAATCCC

Downstream 100 bases:

>100_bases
TTACGTTAACCTGCCGAATGTAGGATAAAAGCAACCTCCTCATATTTTTTTCAGATAAACTTAGCTTTCCTTTTCTCCTT
TACGCAAATAAACCTGAAGT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MAEKNSSRRVESSLKRTRFLGHLGLMAGVFRELEVDKLIDEKLPKERNHNVPHSVCILAMVLNGLGFIGQRLYLFPDFFK
NVSTERLFGDGIIKEDLNQYAIGETLDRIVKYGPTKLFTEIALHIMARLPIPVHCLHADTTSVSVFGDYDDEETESIDIT
FGIPKNGRWDLKQFVLSLIVNQHGIPLFMNTHSGNASDKNTILEAITSLKSVLRPESKVYYVADSSFYTDNNIQNIGTSF
WISRVPATITEAKELLAANLNLQKLKSDERYSFYQTFVEYGGIKQKWVLLLSHKMKEKKEGTFRTKLDKEVEKAEKSFKK
LKVEDFFCEEDALKAAEKWIQDFPSVSFEKVDVKSIKKRESGKKGRPSKDEELKTYFRIDGIIKVNDAFVLKEMEKMGLF
ILASNDISLSPEEMLKYYKGQDNVEKGFRFLKSDTFSISKVYLKKKGRIEALTMIMVLCLMIYSIAEWKLRIKLETENET
VPDQKGKPTKRPTMRWIFFKFQGITELISQKKGKMKSEILNMEEIHWKILSLMGEKYENIYL

Sequences:

>Translated_542_residues
MAEKNSSRRVESSLKRTRFLGHLGLMAGVFRELEVDKLIDEKLPKERNHNVPHSVCILAMVLNGLGFIGQRLYLFPDFFK
NVSTERLFGDGIIKEDLNQYAIGETLDRIVKYGPTKLFTEIALHIMARLPIPVHCLHADTTSVSVFGDYDDEETESIDIT
FGIPKNGRWDLKQFVLSLIVNQHGIPLFMNTHSGNASDKNTILEAITSLKSVLRPESKVYYVADSSFYTDNNIQNIGTSF
WISRVPATITEAKELLAANLNLQKLKSDERYSFYQTFVEYGGIKQKWVLLLSHKMKEKKEGTFRTKLDKEVEKAEKSFKK
LKVEDFFCEEDALKAAEKWIQDFPSVSFEKVDVKSIKKRESGKKGRPSKDEELKTYFRIDGIIKVNDAFVLKEMEKMGLF
ILASNDISLSPEEMLKYYKGQDNVEKGFRFLKSDTFSISKVYLKKKGRIEALTMIMVLCLMIYSIAEWKLRIKLETENET
VPDQKGKPTKRPTMRWIFFKFQGITELISQKKGKMKSEILNMEEIHWKILSLMGEKYENIYL
>Mature_541_residues
AEKNSSRRVESSLKRTRFLGHLGLMAGVFRELEVDKLIDEKLPKERNHNVPHSVCILAMVLNGLGFIGQRLYLFPDFFKN
VSTERLFGDGIIKEDLNQYAIGETLDRIVKYGPTKLFTEIALHIMARLPIPVHCLHADTTSVSVFGDYDDEETESIDITF
GIPKNGRWDLKQFVLSLIVNQHGIPLFMNTHSGNASDKNTILEAITSLKSVLRPESKVYYVADSSFYTDNNIQNIGTSFW
ISRVPATITEAKELLAANLNLQKLKSDERYSFYQTFVEYGGIKQKWVLLLSHKMKEKKEGTFRTKLDKEVEKAEKSFKKL
KVEDFFCEEDALKAAEKWIQDFPSVSFEKVDVKSIKKRESGKKGRPSKDEELKTYFRIDGIIKVNDAFVLKEMEKMGLFI
LASNDISLSPEEMLKYYKGQDNVEKGFRFLKSDTFSISKVYLKKKGRIEALTMIMVLCLMIYSIAEWKLRIKLETENETV
PDQKGKPTKRPTMRWIFFKFQGITELISQKKGKMKSEILNMEEIHWKILSLMGEKYENIYL

Specific function: Unknown

COG id: COG5421

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62623; Mature: 62492

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKNSSRRVESSLKRTRFLGHLGLMAGVFRELEVDKLIDEKLPKERNHNVPHSVCILAM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VLNGLGFIGQRLYLFPDFFKNVSTERLFGDGIIKEDLNQYAIGETLDRIVKYGPTKLFTE
HHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IALHIMARLPIPVHCLHADTTSVSVFGDYDDEETESIDITFGIPKNGRWDLKQFVLSLIV
HHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
NQHGIPLFMNTHSGNASDKNTILEAITSLKSVLRPESKVYYVADSSFYTDNNIQNIGTSF
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCHHHHHHHH
WISRVPATITEAKELLAANLNLQKLKSDERYSFYQTFVEYGGIKQKWVLLLSHKMKEKKE
HHHHCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GTFRTKLDKEVEKAEKSFKKLKVEDFFCEEDALKAAEKWIQDFPSVSFEKVDVKSIKKRE
CCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHH
SGKKGRPSKDEELKTYFRIDGIIKVNDAFVLKEMEKMGLFILASNDISLSPEEMLKYYKG
CCCCCCCCCHHHHHHHHEECCEEEECCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCC
QDNVEKGFRFLKSDTFSISKVYLKKKGRIEALTMIMVLCLMIYSIAEWKLRIKLETENET
CCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCC
VPDQKGKPTKRPTMRWIFFKFQGITELISQKKGKMKSEILNMEEIHWKILSLMGEKYENI
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCC
YL
CC
>Mature Secondary Structure 
AEKNSSRRVESSLKRTRFLGHLGLMAGVFRELEVDKLIDEKLPKERNHNVPHSVCILAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VLNGLGFIGQRLYLFPDFFKNVSTERLFGDGIIKEDLNQYAIGETLDRIVKYGPTKLFTE
HHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IALHIMARLPIPVHCLHADTTSVSVFGDYDDEETESIDITFGIPKNGRWDLKQFVLSLIV
HHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
NQHGIPLFMNTHSGNASDKNTILEAITSLKSVLRPESKVYYVADSSFYTDNNIQNIGTSF
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCHHHHHHHH
WISRVPATITEAKELLAANLNLQKLKSDERYSFYQTFVEYGGIKQKWVLLLSHKMKEKKE
HHHHCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GTFRTKLDKEVEKAEKSFKKLKVEDFFCEEDALKAAEKWIQDFPSVSFEKVDVKSIKKRE
CCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHH
SGKKGRPSKDEELKTYFRIDGIIKVNDAFVLKEMEKMGLFILASNDISLSPEEMLKYYKG
CCCCCCCCCHHHHHHHHEECCEEEECCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCC
QDNVEKGFRFLKSDTFSISKVYLKKKGRIEALTMIMVLCLMIYSIAEWKLRIKLETENET
CCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCC
VPDQKGKPTKRPTMRWIFFKFQGITELISQKKGKMKSEILNMEEIHWKILSLMGEKYENI
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCC
YL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA