| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227027
Identifier: 21227027
GI number: 21227027
Start: 1091374
End: 1091553
Strand: Reverse
Name: 21227027
Synonym: MM_0925
Alternate gene names: NA
Gene position: 1091553-1091374 (Counterclockwise)
Preceding gene: 21227028
Following gene: 21227026
Centisome position: 26.65
GC content: 41.67
Gene sequence:
>180_bases ATGATGCAATCTTTTATAGTGGAGCACTATCTCGAAAGTGCTGTAGACGTTTACTGTGGCGGGCCGGACATTTTCAAAGG AAGCGTAAAAGCATGTGCAGATAATGTACTCACCCTCGAAAATGATGGAAAACTGACACATATAGCCATTGATAAAATCA TAGCTATGTGGCCGCAGTAA
Upstream 100 bases:
>100_bases TTGTATCGGTTTGATAACCTGTATCCAGACAATAAAGCAGGAACAGCCGAATAAACAAAACCAGTTTCCCGAAAAGGGAG ATCAGCAGGAGTGTAAAAGT
Downstream 100 bases:
>100_bases TTTCGAATTGCAGATTTAAGGTGATATAACGCGGCAGACAGGGAAAAAAAGGACATCCATAATCCTTTTTTGAGCTATCT GTATCGCTGAATAATTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MMQSFIVEHYLESAVDVYCGGPDIFKGSVKACADNVLTLENDGKLTHIAIDKIIAMWPQ
Sequences:
>Translated_59_residues MMQSFIVEHYLESAVDVYCGGPDIFKGSVKACADNVLTLENDGKLTHIAIDKIIAMWPQ >Mature_59_residues MMQSFIVEHYLESAVDVYCGGPDIFKGSVKACADNVLTLENDGKLTHIAIDKIIAMWPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6528; Mature: 6528
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQSFIVEHYLESAVDVYCGGPDIFKGSVKACADNVLTLENDGKLTHIAIDKIIAMWPQ CCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCEEEECCCCCEEEHHHHHHHHCCCC >Mature Secondary Structure MMQSFIVEHYLESAVDVYCGGPDIFKGSVKACADNVLTLENDGKLTHIAIDKIIAMWPQ CCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCEEEECCCCCEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA