| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is aor [H]
Identifier: 21227023
GI number: 21227023
Start: 1087157
End: 1088890
Strand: Direct
Name: aor [H]
Synonym: MM_0921
Alternate gene names: 21227023
Gene position: 1087157-1088890 (Clockwise)
Preceding gene: 21227021
Following gene: 21227024
Centisome position: 26.54
GC content: 47.46
Gene sequence:
>1734_bases ATGAAAAGGGATTTTGATATGGTTTACCGGACAGGAAAAACAGTATATATAGACCTTGGCTCGGAATCGGTTAATGCTGT AGAGACTGATGAAAAGTTAGTCCTCAATTACCTTGGGGGGAGAGGGCTCGGAGTAAAACTGCTTTCCGAACTGGCAGATG CTGATATTGATCCCCTCAGCCCGTTAAATCCACTTATTTTCACTGCAGGGCTGATCACGGGACTTGCTCCCATGTCTTCA GGTGCAGTTGTTACATCGAAATCCCCCCTCACAGGCACGGTATTCAGCTGGAACACAGGCGGAGGCTTTGGAAGGGAACT GAAAACAGCTGGAATTGATGCGCTTGTCATTACCGGAAAAGCAAAGAGGCCTTCTCTTGTGGAGGTAAAGGGCGAGAAGA TAAAAGTCAGGCAGGCAGACCATTTATGGGGTAAAAATACGGGAGCATGTACCGAAGCCCTGAAAAATAAAGGAAGCGCA GCCTGTATAGGCAGGGCAGGAGAAAAGGGAGCCCTTATTTCTTCTTTTGTAATTGATTCCATTCACAGCGGCCGGGGAGG CCTGGGAGCTGTTGCAGGCTCAAAGATGTTGAAAGCGGTGATTGTAAAGGGTGAAAAAGAGATCCTGCCTGCCAGCCCTG AGAGTTTTGGGGATCTCAGGGCAAAAATGTTGAAGCTTTTTGAAGCAAACCCTGTACTTTCCAAAGGGCTTTCAAATTAC GGCACTCCTGCATTTGTCAAGCTGCTGGACTATATGGACCTCATCCCGGGAAGAAACTTTTCCGAAAGAAGGACTTCTTT TGCTGACCGTTTCTCAGGTGAGTATATAAAAGCCAGTTTTAATCTCGAAAAAGAAAGCTGCCCCTCCTGCCCCCTGAGCT GTAAACGGAGAATAAAAAAAACAGGGCAAATTCTTCCTGACTACGATTCTTTATGGGCTTTCGGATTTAACCTTGAAAAC CCCGACTTTAACTCCGTGCTCCTGGCAGACAGAATATGCAAAGACTACGGGCTTGACCCTGTTTCTGCGGGTTCGGTACT TGGCGCTCTGGCAGAACTCAAATCAGAAAAAATAGAGGCAAGAGAACTTGAAGGTCTGCTTGAAGAAATGGGAGAAGGAG GCAAAGCCGGGGAAGGTGCCAGAAAATATCTCTCAAGCCGGGGGAGAGAAGATATCAGCATGGATGTAAAAGGGCTTGAA CTCGCAGGGTTTGACCCCAGGGGGATTAAAGGTCAGGCTCTGGCTTACGCGACTTCCTGCCACGGCGGAGATTATCTTAC AGCCTTTATGGTAGGGCCGGAAGTTCTAGGAAAACCACTGATGCTGGACCGCTTCAGCCTTAAAGGAAAAGCCGGAATCC TGCAGGCATTTGAAAACATGACTGCTGTGCTTGATTCTCTTGTACTCTGCCCGTTCTCGGTTTTTGCCGTAGGCGAAGAA CTCTGTTCAGCTTTATTATACGCCGGGACAGGAATAAAAATATCTCCTGCAGAACTCCTGAAGGCTGGGGAAAGGATCTG GAATCTTGAAAGAGTTTACAATATAAAAGCAGGATTCTCTCGAGAAGATGATACACTCCCGCAAAGGCTGTTCGAAACGA GTGAATGGAAAGGAATTGGAATAGATAAGCAGGAGTTTAACGCAGCTCTCCGGGAGTATTATCATTACAGGGGCTGGGAC AGAGAAGGCGTGCCTCTCCAGGAAAAGCTTGAAGAACTGGAAATCGCATACTGA
Upstream 100 bases:
>100_bases TCTTTCAAGATTTTCACGGTAAAAATTACAATTAAAGCTCATTCTCAAAAAGCATTTTCAAAATTTAAGCATCAAGAAAG CCCAGAAAAGATTAAAAGAT
Downstream 100 bases:
>100_bases AAAAATTGAGAAGAATTAAGGGATTTTGGGCAAATCTTAAATTTCTAAGAAAAAATGTCCACAGAAATTAATAATAATCG CCTTTGAACTTTGAAAAGTA
Product: aldehyde ferredoxin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MKRDFDMVYRTGKTVYIDLGSESVNAVETDEKLVLNYLGGRGLGVKLLSELADADIDPLSPLNPLIFTAGLITGLAPMSS GAVVTSKSPLTGTVFSWNTGGGFGRELKTAGIDALVITGKAKRPSLVEVKGEKIKVRQADHLWGKNTGACTEALKNKGSA ACIGRAGEKGALISSFVIDSIHSGRGGLGAVAGSKMLKAVIVKGEKEILPASPESFGDLRAKMLKLFEANPVLSKGLSNY GTPAFVKLLDYMDLIPGRNFSERRTSFADRFSGEYIKASFNLEKESCPSCPLSCKRRIKKTGQILPDYDSLWAFGFNLEN PDFNSVLLADRICKDYGLDPVSAGSVLGALAELKSEKIEARELEGLLEEMGEGGKAGEGARKYLSSRGREDISMDVKGLE LAGFDPRGIKGQALAYATSCHGGDYLTAFMVGPEVLGKPLMLDRFSLKGKAGILQAFENMTAVLDSLVLCPFSVFAVGEE LCSALLYAGTGIKISPAELLKAGERIWNLERVYNIKAGFSREDDTLPQRLFETSEWKGIGIDKQEFNAALREYYHYRGWD REGVPLQEKLEELEIAY
Sequences:
>Translated_577_residues MKRDFDMVYRTGKTVYIDLGSESVNAVETDEKLVLNYLGGRGLGVKLLSELADADIDPLSPLNPLIFTAGLITGLAPMSS GAVVTSKSPLTGTVFSWNTGGGFGRELKTAGIDALVITGKAKRPSLVEVKGEKIKVRQADHLWGKNTGACTEALKNKGSA ACIGRAGEKGALISSFVIDSIHSGRGGLGAVAGSKMLKAVIVKGEKEILPASPESFGDLRAKMLKLFEANPVLSKGLSNY GTPAFVKLLDYMDLIPGRNFSERRTSFADRFSGEYIKASFNLEKESCPSCPLSCKRRIKKTGQILPDYDSLWAFGFNLEN PDFNSVLLADRICKDYGLDPVSAGSVLGALAELKSEKIEARELEGLLEEMGEGGKAGEGARKYLSSRGREDISMDVKGLE LAGFDPRGIKGQALAYATSCHGGDYLTAFMVGPEVLGKPLMLDRFSLKGKAGILQAFENMTAVLDSLVLCPFSVFAVGEE LCSALLYAGTGIKISPAELLKAGERIWNLERVYNIKAGFSREDDTLPQRLFETSEWKGIGIDKQEFNAALREYYHYRGWD REGVPLQEKLEELEIAY >Mature_577_residues MKRDFDMVYRTGKTVYIDLGSESVNAVETDEKLVLNYLGGRGLGVKLLSELADADIDPLSPLNPLIFTAGLITGLAPMSS GAVVTSKSPLTGTVFSWNTGGGFGRELKTAGIDALVITGKAKRPSLVEVKGEKIKVRQADHLWGKNTGACTEALKNKGSA ACIGRAGEKGALISSFVIDSIHSGRGGLGAVAGSKMLKAVIVKGEKEILPASPESFGDLRAKMLKLFEANPVLSKGLSNY GTPAFVKLLDYMDLIPGRNFSERRTSFADRFSGEYIKASFNLEKESCPSCPLSCKRRIKKTGQILPDYDSLWAFGFNLEN PDFNSVLLADRICKDYGLDPVSAGSVLGALAELKSEKIEARELEGLLEEMGEGGKAGEGARKYLSSRGREDISMDVKGLE LAGFDPRGIKGQALAYATSCHGGDYLTAFMVGPEVLGKPLMLDRFSLKGKAGILQAFENMTAVLDSLVLCPFSVFAVGEE LCSALLYAGTGIKISPAELLKAGERIWNLERVYNIKAGFSREDDTLPQRLFETSEWKGIGIDKQEFNAALREYYHYRGWD REGVPLQEKLEELEIAY
Specific function: Catalyzes the oxidation of aldehydes to their corresponding carboxylic acids. May have a pyroglycolytic (saccharolytic) role [H]
COG id: COG2414
COG function: function code C; Aldehyde:ferredoxin oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AOR/FOR family [H]
Homologues:
Organism=Escherichia coli, GI1787962, Length=316, Percent_Identity=28.7974683544304, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013985 - InterPro: IPR013983 - InterPro: IPR001203 [H]
Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]
EC number: =1.2.7.5 [H]
Molecular weight: Translated: 62500; Mature: 62500
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDFDMVYRTGKTVYIDLGSESVNAVETDEKLVLNYLGGRGLGVKLLSELADADIDPLS CCCCHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC PLNPLIFTAGLITGLAPMSSGAVVTSKSPLTGTVFSWNTGGGFGRELKTAGIDALVITGK CCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEECC AKRPSLVEVKGEKIKVRQADHLWGKNTGACTEALKNKGSAACIGRAGEKGALISSFVIDS CCCCCEEEECCCEEEEEEHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH IHSGRGGLGAVAGSKMLKAVIVKGEKEILPASPESFGDLRAKMLKLFEANPVLSKGLSNY HHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC GTPAFVKLLDYMDLIPGRNFSERRTSFADRFSGEYIKASFNLEKESCPSCPLSCKRRIKK CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCHHHHHHHHH TGQILPDYDSLWAFGFNLENPDFNSVLLADRICKDYGLDPVSAGSVLGALAELKSEKIEA HCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RELEGLLEEMGEGGKAGEGARKYLSSRGREDISMDVKGLELAGFDPRGIKGQALAYATSC HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCCEEEEEECC HGGDYLTAFMVGPEVLGKPLMLDRFSLKGKAGILQAFENMTAVLDSLVLCPFSVFAVGEE CCCCEEEEEEECHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCSALLYAGTGIKISPAELLKAGERIWNLERVYNIKAGFSREDDTLPQRLFETSEWKGIG HHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCCCCC IDKQEFNAALREYYHYRGWDREGVPLQEKLEELEIAY CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKRDFDMVYRTGKTVYIDLGSESVNAVETDEKLVLNYLGGRGLGVKLLSELADADIDPLS CCCCHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC PLNPLIFTAGLITGLAPMSSGAVVTSKSPLTGTVFSWNTGGGFGRELKTAGIDALVITGK CCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEECC AKRPSLVEVKGEKIKVRQADHLWGKNTGACTEALKNKGSAACIGRAGEKGALISSFVIDS CCCCCEEEECCCEEEEEEHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH IHSGRGGLGAVAGSKMLKAVIVKGEKEILPASPESFGDLRAKMLKLFEANPVLSKGLSNY HHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC GTPAFVKLLDYMDLIPGRNFSERRTSFADRFSGEYIKASFNLEKESCPSCPLSCKRRIKK CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCHHHHHHHHH TGQILPDYDSLWAFGFNLENPDFNSVLLADRICKDYGLDPVSAGSVLGALAELKSEKIEA HCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RELEGLLEEMGEGGKAGEGARKYLSSRGREDISMDVKGLELAGFDPRGIKGQALAYATSC HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCCEEEEEECC HGGDYLTAFMVGPEVLGKPLMLDRFSLKGKAGILQAFENMTAVLDSLVLCPFSVFAVGEE CCCCEEEEEEECHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCSALLYAGTGIKISPAELLKAGERIWNLERVYNIKAGFSREDDTLPQRLFETSEWKGIG HHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCCCCC IDKQEFNAALREYYHYRGWDREGVPLQEKLEELEIAY CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7642512; 7878465 [H]