| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is nudG [C]
Identifier: 21227022
GI number: 21227022
Start: 1086581
End: 1087018
Strand: Reverse
Name: nudG [C]
Synonym: MM_0920
Alternate gene names: 21227022
Gene position: 1087018-1086581 (Counterclockwise)
Preceding gene: 21227026
Following gene: 21227010
Centisome position: 26.54
GC content: 46.35
Gene sequence:
>438_bases ATGAACCTGGAGAAACCTTATATCATTTCCGTATATGCTCTCATCCGGAACGAAAAAGGGGAATTTCTGCTGCTCAGGCG CTCGGAAAATTCCCGCACCAATGCAGGAAAGTGGGACCTTCCGGGAGGAAAGGTAAACCCGGACGAGTCTCTTAAAGAAG GGGTTGCGCGTGAAGTCTGGGAGGAAACCGGAATTACAATGGTTCCCGGGGATATTGCAGGGCAGGTAAACTTTGAACTC ACTGAAAAGAAGGTCATTGCTATCGTGTTTGATGGGGGGTATGTTGTCGCTGACGTTAAATTGAGCTATGAGCACATTGA ATATTCCTGGGTCTCGCTGGAAAAGATTCTCGGTATGGAGACGCTCCCGGCTTATTTCCGGGATTTCTTTGAAAGGTTTG ATCGTGAGAACAAAAAACCTTCAAAGCTCTTTATTTAA
Upstream 100 bases:
>100_bases TTTGAAAATGCTTTTTGAGAATGAGCTTTAATTGTAATTTTTACCGTGAAAATCTTGAAAGAGCCATTCTTTAAGGCAGA GAAATTGTAGATAATATTAC
Downstream 100 bases:
>100_bases TCTGAGTATTGCATTTTTTATCCTTTGGATTTTTTATTCTTTAAAATACTCATCTTCGAGTTTTTTTCTTTTTCTTCGGC TTTTCTGCCAGCTTATCCCC
Product: MutT-like protein
Products: CMP; diphosphate [C]
Alternate protein names: ORF154 [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNLEKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFEL TEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENKKPSKLFI
Sequences:
>Translated_145_residues MNLEKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFEL TEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENKKPSKLFI >Mature_145_residues MNLEKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFEL TEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENKKPSKLFI
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 16681; Mature: 16681
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVW CCCCCCHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EETGITMVPGDIAGQVNFELTEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGME HHCCCEEECCCCCCEEEEEEECCEEEEEEECCCEEEEEEEEEEEHEEEHHHHHHHHHCCC TLPAYFRDFFERFDRENKKPSKLFI HHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNLEKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVW CCCCCCHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EETGITMVPGDIAGQVNFELTEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGME HHCCCEEECCCCCCEEEEEEECCEEEEEEECCCEEEEEEEEEEEHEEEHHHHHHHHHCCC TLPAYFRDFFERFDRENKKPSKLFI HHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934842 [H]