Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227026

Identifier: 21227026

GI number: 21227026

Start: 1090981

End: 1091157

Strand: Reverse

Name: 21227026

Synonym: MM_0924

Alternate gene names: NA

Gene position: 1091157-1090981 (Counterclockwise)

Preceding gene: 21227027

Following gene: 21227022

Centisome position: 26.64

GC content: 41.24

Gene sequence:

>177_bases
ATGCAGTGTTTTATAGTGGAGCACTATTTTGACGAAGTTTTGGATGTTTACTGTGGGGGTTCAGACGTTTTTAACGGAAA
GGTTAAAGCCTGCGCAGATAACGTTCTAACTCTTGACAAGAATGGAAAATTCACGCACATAGCAATCGATAAGATCATAG
CGGTCTGGCGTGCATAA

Upstream 100 bases:

>100_bases
CCGGGTTTTTTGCTCAGCCAGGTTTTTATTCTCCATTACCTGGGTGGAAGCTGATCCTTTATTCCACAGGAGCGAAAATG
AACACACCGAGGTGCAGAAA

Downstream 100 bases:

>100_bases
AAGGGAAAACGAGCATAATCGAGCCAGTTTTTTGAACCGAAAGCTGTCAGATAGAGCAGTTGAATAACAGGACTGAGTAG
CAGAAAAGTCTTTGAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA

Sequences:

>Translated_58_residues
MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA
>Mature_58_residues
MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6523; Mature: 6523

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA
CEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCEEEEHHHHHHHHHCC
>Mature Secondary Structure
MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA
CEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA