| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227026
Identifier: 21227026
GI number: 21227026
Start: 1090981
End: 1091157
Strand: Reverse
Name: 21227026
Synonym: MM_0924
Alternate gene names: NA
Gene position: 1091157-1090981 (Counterclockwise)
Preceding gene: 21227027
Following gene: 21227022
Centisome position: 26.64
GC content: 41.24
Gene sequence:
>177_bases ATGCAGTGTTTTATAGTGGAGCACTATTTTGACGAAGTTTTGGATGTTTACTGTGGGGGTTCAGACGTTTTTAACGGAAA GGTTAAAGCCTGCGCAGATAACGTTCTAACTCTTGACAAGAATGGAAAATTCACGCACATAGCAATCGATAAGATCATAG CGGTCTGGCGTGCATAA
Upstream 100 bases:
>100_bases CCGGGTTTTTTGCTCAGCCAGGTTTTTATTCTCCATTACCTGGGTGGAAGCTGATCCTTTATTCCACAGGAGCGAAAATG AACACACCGAGGTGCAGAAA
Downstream 100 bases:
>100_bases AAGGGAAAACGAGCATAATCGAGCCAGTTTTTTGAACCGAAAGCTGTCAGATAGAGCAGTTGAATAACAGGACTGAGTAG CAGAAAAGTCTTTGAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA
Sequences:
>Translated_58_residues MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA >Mature_58_residues MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6523; Mature: 6523
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA CEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCEEEEHHHHHHHHHCC >Mature Secondary Structure MQCFIVEHYFDEVLDVYCGGSDVFNGKVKACADNVLTLDKNGKFTHIAIDKIIAVWRA CEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA