The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227016

Identifier: 21227016

GI number: 21227016

Start: 1081503

End: 1082015

Strand: Direct

Name: 21227016

Synonym: MM_0914

Alternate gene names: NA

Gene position: 1081503-1082015 (Clockwise)

Preceding gene: 21227015

Following gene: 21227017

Centisome position: 26.4

GC content: 40.94

Gene sequence:

>513_bases
GTGAATTTTTTGGTAAAGGTTTTCATTTACCCTATAAACAGTCTTATTCTTGCTGATCTTGTTGAACGTTTCGGGCACAG
GCCCCTTAGCATGATGAACCAGATACGAGAAAAAGTTACAAACATCGGCCTGGACTCTCCCCCTATTAATATCACTTCCG
AAGACCCTAAACTTGGTCTTAAATATGCTGCAATTGAAGTGCCTGCCGGAGTAAGAGGAAGGATGTCACTTATAGGTCCA
CTGATAGAAGAGACCGAAGCTGCAATTATAGTTGAAAATCCTCCTGCTAATTTTGGCTGTGTGGGCTGTAACCGTACAAA
TGAGTTAATGAAATATCTGGTCCGCTCAAAAAATGTCCCCATACTTGAAGTAAAGTATCCTGAATCCAGTGAAGAAGCCC
GGGATTTTGTAAGCCAGATCGCAGAATTCCTGGAATCATTGCCTAAAGAAAATTCTGAAGAAAGTAATAAGGCAGACAAA
GAAAAAACAGCTGAAGAGGAGGACAGTAAATGA

Upstream 100 bases:

>100_bases
ATGACCTGGAAGCAAAAGGATGTGTAAAAGAGAAGCCAGAGGAGAAACGCAGACTTAAAGTTTCGGAGCTTGAAAAAGTT
ATTGAAGCGGAACTTTCGAG

Downstream 100 bases:

>100_bases
GCACTGAAGAATCCGGACTTGTCAAGATTGCCCTGGTGTCCTGCGGCTCCGAATATGCGGGAGTCCAGCCTGAATTTGAT
GAAGCTGCAGCCAAAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNFLVKVFIYPINSLILADLVERFGHRPLSMMNQIREKVTNIGLDSPPINITSEDPKLGLKYAAIEVPAGVRGRMSLIGP
LIEETEAAIIVENPPANFGCVGCNRTNELMKYLVRSKNVPILEVKYPESSEEARDFVSQIAEFLESLPKENSEESNKADK
EKTAEEEDSK

Sequences:

>Translated_170_residues
MNFLVKVFIYPINSLILADLVERFGHRPLSMMNQIREKVTNIGLDSPPINITSEDPKLGLKYAAIEVPAGVRGRMSLIGP
LIEETEAAIIVENPPANFGCVGCNRTNELMKYLVRSKNVPILEVKYPESSEEARDFVSQIAEFLESLPKENSEESNKADK
EKTAEEEDSK
>Mature_170_residues
MNFLVKVFIYPINSLILADLVERFGHRPLSMMNQIREKVTNIGLDSPPINITSEDPKLGLKYAAIEVPAGVRGRMSLIGP
LIEETEAAIIVENPPANFGCVGCNRTNELMKYLVRSKNVPILEVKYPESSEEARDFVSQIAEFLESLPKENSEESNKADK
EKTAEEEDSK

Specific function: Unknown

COG id: COG4050

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012356 [H]

Pfam domain/function: PF09885 DUF2112 [H]

EC number: NA

Molecular weight: Translated: 19010; Mature: 19010

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLVKVFIYPINSLILADLVERFGHRPLSMMNQIREKVTNIGLDSPPINITSEDPKLGL
CCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
KYAAIEVPAGVRGRMSLIGPLIEETEAAIIVENPPANFGCVGCNRTNELMKYLVRSKNVP
EEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCC
ILEVKYPESSEEARDFVSQIAEFLESLPKENSEESNKADKEKTAEEEDSK
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNFLVKVFIYPINSLILADLVERFGHRPLSMMNQIREKVTNIGLDSPPINITSEDPKLGL
CCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
KYAAIEVPAGVRGRMSLIGPLIEETEAAIIVENPPANFGCVGCNRTNELMKYLVRSKNVP
EEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCC
ILEVKYPESSEEARDFVSQIAEFLESLPKENSEESNKADKEKTAEEEDSK
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]