| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227015
Identifier: 21227015
GI number: 21227015
Start: 1081063
End: 1081506
Strand: Direct
Name: 21227015
Synonym: MM_0913
Alternate gene names: NA
Gene position: 1081063-1081506 (Clockwise)
Preceding gene: 21227014
Following gene: 21227016
Centisome position: 26.39
GC content: 45.05
Gene sequence:
>444_bases ATGACAGAGATAAAAAAGGAAGAGATTACGAAAGTTATTGTAATCAGTTCGGATAAAGTGCTGCCTTCAGACGCAGCCAT GAAGATTTACGAATCAGAGTTTCCGGTTACTGTAAAGGAAACCTGCTTTGGATTGATTGTAACAGGTCCTAAAGAAGATG TTTTATCAGTGGCCGAAAAGATCCGGGAACTGGATAAAAACCATATTTTTATAAAAGATAGGGGATTTCCTGCTGGCGAC GAGAGACGCTGCCGGGCAAGCCGGGGGGGAGGTCCGAGACCTGGATTCCATTTCCTGAGAGAAGAAGTTGAGATGCTCCC TGCCATAGGGGCTGCACTCGATGACCTGGAAGCAAAAGGATGTGTAAAAGAGAAGCCAGAGGAGAAACGCAGACTTAAAG TTTCGGAGCTTGAAAAAGTTATTGAAGCGGAACTTTCGAGGTGA
Upstream 100 bases:
>100_bases AAATAATACATAAGCGAAATAAATACCCGATGCTTGAGTGGATTCACATATTTTGATTTTTTTTCAGGTGAAGTCTCCCG AAGCTAAGGAGAGACAGAAA
Downstream 100 bases:
>100_bases ATTTTTTGGTAAAGGTTTTCATTTACCCTATAAACAGTCTTATTCTTGCTGATCTTGTTGAACGTTTCGGGCACAGGCCC CTTAGCATGATGAACCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGD ERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKGCVKEKPEEKRRLKVSELEKVIEAELSR
Sequences:
>Translated_147_residues MTEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGD ERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKGCVKEKPEEKRRLKVSELEKVIEAELSR >Mature_146_residues TEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGDE RRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKGCVKEKPEEKRRLKVSELEKVIEAELSR
Specific function: Unknown
COG id: COG4029
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012025 [H]
Pfam domain/function: PF09875 DUF2102 [H]
EC number: NA
Molecular weight: Translated: 16496; Mature: 16365
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEK CCCCCHHHCEEEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHEEEEEECCHHHHHHHHHH IRELDKNHIFIKDRGFPAGDERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKG HHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC CVKEKPEEKRRLKVSELEKVIEAELSR CCCCCCHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure TEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEK CCCCHHHCEEEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHEEEEEECCHHHHHHHHHH IRELDKNHIFIKDRGFPAGDERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKG HHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC CVKEKPEEKRRLKVSELEKVIEAELSR CCCCCCHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]