Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227015

Identifier: 21227015

GI number: 21227015

Start: 1081063

End: 1081506

Strand: Direct

Name: 21227015

Synonym: MM_0913

Alternate gene names: NA

Gene position: 1081063-1081506 (Clockwise)

Preceding gene: 21227014

Following gene: 21227016

Centisome position: 26.39

GC content: 45.05

Gene sequence:

>444_bases
ATGACAGAGATAAAAAAGGAAGAGATTACGAAAGTTATTGTAATCAGTTCGGATAAAGTGCTGCCTTCAGACGCAGCCAT
GAAGATTTACGAATCAGAGTTTCCGGTTACTGTAAAGGAAACCTGCTTTGGATTGATTGTAACAGGTCCTAAAGAAGATG
TTTTATCAGTGGCCGAAAAGATCCGGGAACTGGATAAAAACCATATTTTTATAAAAGATAGGGGATTTCCTGCTGGCGAC
GAGAGACGCTGCCGGGCAAGCCGGGGGGGAGGTCCGAGACCTGGATTCCATTTCCTGAGAGAAGAAGTTGAGATGCTCCC
TGCCATAGGGGCTGCACTCGATGACCTGGAAGCAAAAGGATGTGTAAAAGAGAAGCCAGAGGAGAAACGCAGACTTAAAG
TTTCGGAGCTTGAAAAAGTTATTGAAGCGGAACTTTCGAGGTGA

Upstream 100 bases:

>100_bases
AAATAATACATAAGCGAAATAAATACCCGATGCTTGAGTGGATTCACATATTTTGATTTTTTTTCAGGTGAAGTCTCCCG
AAGCTAAGGAGAGACAGAAA

Downstream 100 bases:

>100_bases
ATTTTTTGGTAAAGGTTTTCATTTACCCTATAAACAGTCTTATTCTTGCTGATCTTGTTGAACGTTTCGGGCACAGGCCC
CTTAGCATGATGAACCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGD
ERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKGCVKEKPEEKRRLKVSELEKVIEAELSR

Sequences:

>Translated_147_residues
MTEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGD
ERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKGCVKEKPEEKRRLKVSELEKVIEAELSR
>Mature_146_residues
TEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEKIRELDKNHIFIKDRGFPAGDE
RRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKGCVKEKPEEKRRLKVSELEKVIEAELSR

Specific function: Unknown

COG id: COG4029

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012025 [H]

Pfam domain/function: PF09875 DUF2102 [H]

EC number: NA

Molecular weight: Translated: 16496; Mature: 16365

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEK
CCCCCHHHCEEEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHEEEEEECCHHHHHHHHHH
IRELDKNHIFIKDRGFPAGDERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKG
HHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
CVKEKPEEKRRLKVSELEKVIEAELSR
CCCCCCHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEIKKEEITKVIVISSDKVLPSDAAMKIYESEFPVTVKETCFGLIVTGPKEDVLSVAEK
CCCCHHHCEEEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHEEEEEECCHHHHHHHHHH
IRELDKNHIFIKDRGFPAGDERRCRASRGGGPRPGFHFLREEVEMLPAIGAALDDLEAKG
HHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
CVKEKPEEKRRLKVSELEKVIEAELSR
CCCCCCHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]