Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227014

Identifier: 21227014

GI number: 21227014

Start: 1079317

End: 1080894

Strand: Direct

Name: 21227014

Synonym: MM_0912

Alternate gene names: NA

Gene position: 1079317-1080894 (Clockwise)

Preceding gene: 21227013

Following gene: 21227015

Centisome position: 26.35

GC content: 45.44

Gene sequence:

>1578_bases
GTGCCGATTACGAGTAATGAGATCAGCGTAGAGGTGAACGGGCAGGTTTACACTTTGCCCGCAGGCTCTACCCTTGGAGA
CGCCCTTAAAGTTTCCAGAGCCCCCTACATAGCCGGTGCAGCGATTGGGATTCTCAAAAAAGCCGCTGAAAAGAGAACGG
AGAAAATCACCGAATACGCTATCAATACGCCCAAAGGGGAGCTGAGGATAGAAATCAAAGACCCCGAGTCAACCTCAGGA
AAATTATGGGCCGAACATTATAAAGAATACGAAGGAAAGGACATCCACTGGGAAAGCCCTGAAGCTCTGGCTTTCGGACC
TTTTGAAGCCGATATAAAACCTTCGCGTGAAACAGGAAACTTTGAAGCTTTTGATGTCCTTTTCGGAGCTGGAGGGTTTG
ATCCGCACAATACTCATCTGATCCTGTCAAGGAAAAGACATTCAGCCGAGTATGGGTCTCCTGATGATGGTGTTTTTGCA
AGCATTGTAACCGGGAGAAAAATAATTTCCAAGATTTCCAAAGAAGATTCTATCCTGAGCATAGAGCCTGTTATAGAATG
GGAACGGATTACAGAGAAAACATGCACTACCGACCTCTCGACCCCTCTCGAAGACGAGGACAGTGTATATACTTATTTTG
AGGTTGAGCTTTCCAGAAATGCTCCTGTGGGGGCAGAGCATTTCTATGCCCTGACCCGTGAAGGGACACTTAAAGTAGAT
GCGGTTACCAGCTCGTTTATTTCTGACGACAGTCTCAGGGAAGTGCCTGCTCCTTATGAAAATTTTGAGCAGAGAAGAGA
AGGTGCCATTTCGGTAAGGACAGTTGGATACGGGACAGGTAGAATATATATTTCAAGAGAAGAACGCCCTTCAAGCCTTG
TGCATTCTGTCGTGGGACAGGTAACAAAAGGGCTCGAACTCATAAAACTTGCAGAAAAGGGGCAAAAACTGTCAGTAGAA
AGTCTTCCTCCCCAGATCGTCCTTCTAGGGCACAGCTTTGAAGAGGTGGAGCCTTTACTTTCCTCTATTGGAGTTGAACT
GATAAAAGAAGGCTACGCCGGAGAAAATTCGGTGATTGTCAGGCAGGAACCCCCAACTACCCTGGAAATTCTCGGAGAGG
CTAAAGTAAAGGCATATGCCGTAGCCAGGACAAAACTCATCGAGGTTGAACTTTATACGGAGATAGCTCCAAAATCTATT
GACTTTTTCCGCCACGCTCTTGATCTTAAAACCAAAACCGTCGGAAAACTTCCCGTTCATATGATATACGAGACCACTTA
CCTTTTTAAAACGGAAAAGGAAATGGTGAAATATAAGGAAATCCTCCCTGAAAACACGCCTGAGAAGAAAGTACTGGCTG
GGGAAATAGGAATCACAAACCAGGCAGCAAAGAGAATGGGTACAATAGGAGTCAGACTTATAGATGACGATCTTTTCGGC
CCCACAGGAGAGAAATTCTCTTCCACAAACATTATCGGCAGAATTGTCGAGCCTGACAGACTCAAAGGCATCAAAGAAGG
AGATGCCATATACATAACCGAAGTTGCACGCAAAGAAAATGGTGGCCAGAAAAATTGA

Upstream 100 bases:

>100_bases
AGAACGTACTTTCCCAGCTTACAGAAGAAGAAAAGATCAAAGCTGCAGAAGAAATATAAATATGCTGCCACCTCTTAGTA
TGGAAAAATACTAAAATGAG

Downstream 100 bases:

>100_bases
GAACAGGGATAAGAATAATTAGTGAAGTATAAAAATAGCCGCATAAATTGATAAGTAATGCAACAATAAAATAATACATA
AGCGAAATAAATACCCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MPITSNEISVEVNGQVYTLPAGSTLGDALKVSRAPYIAGAAIGILKKAAEKRTEKITEYAINTPKGELRIEIKDPESTSG
KLWAEHYKEYEGKDIHWESPEALAFGPFEADIKPSRETGNFEAFDVLFGAGGFDPHNTHLILSRKRHSAEYGSPDDGVFA
SIVTGRKIISKISKEDSILSIEPVIEWERITEKTCTTDLSTPLEDEDSVYTYFEVELSRNAPVGAEHFYALTREGTLKVD
AVTSSFISDDSLREVPAPYENFEQRREGAISVRTVGYGTGRIYISREERPSSLVHSVVGQVTKGLELIKLAEKGQKLSVE
SLPPQIVLLGHSFEEVEPLLSSIGVELIKEGYAGENSVIVRQEPPTTLEILGEAKVKAYAVARTKLIEVELYTEIAPKSI
DFFRHALDLKTKTVGKLPVHMIYETTYLFKTEKEMVKYKEILPENTPEKKVLAGEIGITNQAAKRMGTIGVRLIDDDLFG
PTGEKFSSTNIIGRIVEPDRLKGIKEGDAIYITEVARKENGGQKN

Sequences:

>Translated_525_residues
MPITSNEISVEVNGQVYTLPAGSTLGDALKVSRAPYIAGAAIGILKKAAEKRTEKITEYAINTPKGELRIEIKDPESTSG
KLWAEHYKEYEGKDIHWESPEALAFGPFEADIKPSRETGNFEAFDVLFGAGGFDPHNTHLILSRKRHSAEYGSPDDGVFA
SIVTGRKIISKISKEDSILSIEPVIEWERITEKTCTTDLSTPLEDEDSVYTYFEVELSRNAPVGAEHFYALTREGTLKVD
AVTSSFISDDSLREVPAPYENFEQRREGAISVRTVGYGTGRIYISREERPSSLVHSVVGQVTKGLELIKLAEKGQKLSVE
SLPPQIVLLGHSFEEVEPLLSSIGVELIKEGYAGENSVIVRQEPPTTLEILGEAKVKAYAVARTKLIEVELYTEIAPKSI
DFFRHALDLKTKTVGKLPVHMIYETTYLFKTEKEMVKYKEILPENTPEKKVLAGEIGITNQAAKRMGTIGVRLIDDDLFG
PTGEKFSSTNIIGRIVEPDRLKGIKEGDAIYITEVARKENGGQKN
>Mature_524_residues
PITSNEISVEVNGQVYTLPAGSTLGDALKVSRAPYIAGAAIGILKKAAEKRTEKITEYAINTPKGELRIEIKDPESTSGK
LWAEHYKEYEGKDIHWESPEALAFGPFEADIKPSRETGNFEAFDVLFGAGGFDPHNTHLILSRKRHSAEYGSPDDGVFAS
IVTGRKIISKISKEDSILSIEPVIEWERITEKTCTTDLSTPLEDEDSVYTYFEVELSRNAPVGAEHFYALTREGTLKVDA
VTSSFISDDSLREVPAPYENFEQRREGAISVRTVGYGTGRIYISREERPSSLVHSVVGQVTKGLELIKLAEKGQKLSVES
LPPQIVLLGHSFEEVEPLLSSIGVELIKEGYAGENSVIVRQEPPTTLEILGEAKVKAYAVARTKLIEVELYTEIAPKSID
FFRHALDLKTKTVGKLPVHMIYETTYLFKTEKEMVKYKEILPENTPEKKVLAGEIGITNQAAKRMGTIGVRLIDDDLFGP
TGEKFSSTNIIGRIVEPDRLKGIKEGDAIYITEVARKENGGQKN

Specific function: Unknown

COG id: COG4070

COG function: function code O; Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0288 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y912_METMA (Q8PYF0)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_632936.1
- GeneID:   1479254
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_0912
- NMPDR:   fig|192952.1.peg.912
- HOGENOM:   HBG541903
- OMA:   FKKWDVV
- ProtClustDB:   PRK00969
- BioCyc:   MMAZ192952:MM0912-MONOMER
- HAMAP:   MF_01089
- InterPro:   IPR016466
- PIRSF:   PIRSF005852
- TIGRFAMs:   TIGR03268

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58096; Mature: 57964

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITSNEISVEVNGQVYTLPAGSTLGDALKVSRAPYIAGAAIGILKKAAEKRTEKITEYA
CCCCCCEEEEEECCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
INTPKGELRIEIKDPESTSGKLWAEHYKEYEGKDIHWESPEALAFGPFEADIKPSRETGN
CCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
FEAFDVLFGAGGFDPHNTHLILSRKRHSAEYGSPDDGVFASIVTGRKIISKISKEDSILS
EEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEE
IEPVIEWERITEKTCTTDLSTPLEDEDSVYTYFEVELSRNAPVGAEHFYALTREGTLKVD
ECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHEEEEECCCEEEEE
AVTSSFISDDSLREVPAPYENFEQRREGAISVRTVGYGTGRIYISREERPSSLVHSVVGQ
EHHHHHHCCCCHHHCCCCHHHHHHHHCCCEEEEEEEEECCEEEEECCCCHHHHHHHHHHH
VTKGLELIKLAEKGQKLSVESLPPQIVLLGHSFEEVEPLLSSIGVELIKEGYAGENSVIV
HHCCHHHHHHHHCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
RQEPPTTLEILGEAKVKAYAVARTKLIEVELYTEIAPKSIDFFRHALDLKTKTVGKLPVH
ECCCCCEEEEECCCHHEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHCCCCCEE
MIYETTYLFKTEKEMVKYKEILPENTPEKKVLAGEIGITNQAAKRMGTIGVRLIDDDLFG
EEEEEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEEEEECCCCC
PTGEKFSSTNIIGRIVEPDRLKGIKEGDAIYITEVARKENGGQKN
CCCCCCCCCCEEEEECCHHHHCCCCCCCEEEEEEEHHCCCCCCCC
>Mature Secondary Structure 
PITSNEISVEVNGQVYTLPAGSTLGDALKVSRAPYIAGAAIGILKKAAEKRTEKITEYA
CCCCCEEEEEECCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
INTPKGELRIEIKDPESTSGKLWAEHYKEYEGKDIHWESPEALAFGPFEADIKPSRETGN
CCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
FEAFDVLFGAGGFDPHNTHLILSRKRHSAEYGSPDDGVFASIVTGRKIISKISKEDSILS
EEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEE
IEPVIEWERITEKTCTTDLSTPLEDEDSVYTYFEVELSRNAPVGAEHFYALTREGTLKVD
ECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHEEEEECCCEEEEE
AVTSSFISDDSLREVPAPYENFEQRREGAISVRTVGYGTGRIYISREERPSSLVHSVVGQ
EHHHHHHCCCCHHHCCCCHHHHHHHHCCCEEEEEEEEECCEEEEECCCCHHHHHHHHHHH
VTKGLELIKLAEKGQKLSVESLPPQIVLLGHSFEEVEPLLSSIGVELIKEGYAGENSVIV
HHCCHHHHHHHHCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
RQEPPTTLEILGEAKVKAYAVARTKLIEVELYTEIAPKSIDFFRHALDLKTKTVGKLPVH
ECCCCCEEEEECCCHHEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHCCCCCEE
MIYETTYLFKTEKEMVKYKEILPENTPEKKVLAGEIGITNQAAKRMGTIGVRLIDDDLFG
EEEEEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEEEEECCCCC
PTGEKFSSTNIIGRIVEPDRLKGIKEGDAIYITEVARKENGGQKN
CCCCCCCCCCEEEEECCHHHHCCCCCCCEEEEEEEHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12125824