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The map label for this gene is nodV [H]

Identifier: 21226991

GI number: 21226991

Start: 1048887

End: 1050470

Strand: Reverse

Name: nodV [H]

Synonym: MM_0889

Alternate gene names: 21226991

Gene position: 1050470-1048887 (Counterclockwise)

Preceding gene: 21226992

Following gene: 21226988

Centisome position: 25.64

GC content: 40.34

Gene sequence:

>1584_bases
ATGGGGAAGAACATTAGGAGTTCTGGTATCGAGATTATTGGAGACACTCCCTGGGGAGCCCGCTTATGCCAGTTTGAATT
GAAAGAATCATACGATCATTTAGAAGAATTAGTACAAGAACGAACGGTGCAGCTTGAAAAGGCTTACAAGCGGTTGAAAG
AAAGTGAGATAGACCTTTCTGAAGCTCAAAAAATGGCTCATATTGGAAGCTGGAAATGGGATATTGTAACTGGCGAACTC
TACTGGTCTGATGAACTTTATCTTATCTTCGGACTTGATCCTCAGGAATTCAGACCAGCTTACAATTCATTTTTTAATTA
TATACATCCCGGTGATCGAGACTTTGTGGATAATGCCATTAAAAAAGCTTTGAATGGAGAGCAGCTCTATGACAATGACC
ACAGGATTATCTCAGCTGATGGAGAAGAGCGCATAGTCCATTCCCATGGAGAAGTTATTTTTGATGAGAAAAATACTCCT
GTCCGAATGAGAGGGACACTCCAGGACATTACGGAGCGTACTAAGATCGAAGACTCGCTTTTATTAAGCGAGGAGAGGTA
CCGTTCTTTTATACAGAACTTTACGGGGATTGCTTTTCAGCAAGACGAGGACCTCAACCTGGAGTTTGTAAAAGGGAACG
TAGAAGAGATTACCGGGTACAGTGAAGAAGAATTAATGTCTAAAAAGCGGTGGAGAAAAATTGTTGAGAAGCAGGACCTC
CCGTTATTCCTCAAAAAAGAAAGAGAGATCAAAAATGCTCGCTCTCCATATTCTGGAAAACTTAGCTACAGAATAAGATG
CAAGGACGGAAAAATAAAATGGGTGCATGAAGTATACCAGAAAATTCCAGGCAAAAATGGGAGACCTGATAATCACCAGA
GTACAATAACCGACGTTACCGAGAGAATAAAGGCAAAAGAAACCCTGGTAAAAATTGAGGACGCCAGGAAAAAAGAAATC
CACCACAGAATAAAAAACAACCTCCAGGTTATCTCTTCTCTTCTTGACCTTCAGGCTGAAACATTCAACCATAGAGAGAC
AGTTACTGCTCCGGAAATTCTTGAAGCTTTCAGGGAAAGTCAGAACCGGGTAATCTCGATGTCCCTTATTCATGAAGAAC
TCTACAGGGGAGAGGGAACCGATACACTGAATTTTTCGGTATACCTTCGAAAGCTGGCTGAAAAACTTTTACAGACTTAC
AGCCTGAGCAATAAAAATATTTCTCTATTTATGAATCTTGAAGAAAATGCATTCTTTAATATGGATGTTGCTGTCCCGTT
AGGAATAATTGTTAATGAACTCGTTTCCAACTCCATCAAACATGCGTTTACTGAACAAAATGGGGAAGTTCAAATCCAGC
TTTTCAGGGAAGAACAGAATAACGAAATACATAAATCCCTTTTCAGCCTGACGATTTCTGATAATGGAAAAGGAATTTCT
GAAAATATAGAATTAGGAAGTGTTAAATCACTCGGACTGCAGCTGGTTAACACTCTTGTTGACCAGGTAGATGGAGAGAT
CGAGCTTGAGAGAGCAGGAGGAACGAAATTCAGAATTACATTCTGGGCAGCGGAAAGGTCATAA

Upstream 100 bases:

>100_bases
AAAACTTAAAATTATTTTAGAATTTGATGATATTACAATAACGCTGGAGTTATGTCTCTAAACCTGCCGCTGCTTAAGTC
CTGAGTTAGAGGGGATGTTA

Downstream 100 bases:

>100_bases
GTCTGGATAAAAGCATCAGCGTCGTCAAAATCCTTAATTATTAGTTCTCAGAAGAACCAACCGCAGGTTATTCAGATATA
AAGATGGACGCATAAGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MGKNIRSSGIEIIGDTPWGARLCQFELKESYDHLEELVQERTVQLEKAYKRLKESEIDLSEAQKMAHIGSWKWDIVTGEL
YWSDELYLIFGLDPQEFRPAYNSFFNYIHPGDRDFVDNAIKKALNGEQLYDNDHRIISADGEERIVHSHGEVIFDEKNTP
VRMRGTLQDITERTKIEDSLLLSEERYRSFIQNFTGIAFQQDEDLNLEFVKGNVEEITGYSEEELMSKKRWRKIVEKQDL
PLFLKKEREIKNARSPYSGKLSYRIRCKDGKIKWVHEVYQKIPGKNGRPDNHQSTITDVTERIKAKETLVKIEDARKKEI
HHRIKNNLQVISSLLDLQAETFNHRETVTAPEILEAFRESQNRVISMSLIHEELYRGEGTDTLNFSVYLRKLAEKLLQTY
SLSNKNISLFMNLEENAFFNMDVAVPLGIIVNELVSNSIKHAFTEQNGEVQIQLFREEQNNEIHKSLFSLTISDNGKGIS
ENIELGSVKSLGLQLVNTLVDQVDGEIELERAGGTKFRITFWAAERS

Sequences:

>Translated_527_residues
MGKNIRSSGIEIIGDTPWGARLCQFELKESYDHLEELVQERTVQLEKAYKRLKESEIDLSEAQKMAHIGSWKWDIVTGEL
YWSDELYLIFGLDPQEFRPAYNSFFNYIHPGDRDFVDNAIKKALNGEQLYDNDHRIISADGEERIVHSHGEVIFDEKNTP
VRMRGTLQDITERTKIEDSLLLSEERYRSFIQNFTGIAFQQDEDLNLEFVKGNVEEITGYSEEELMSKKRWRKIVEKQDL
PLFLKKEREIKNARSPYSGKLSYRIRCKDGKIKWVHEVYQKIPGKNGRPDNHQSTITDVTERIKAKETLVKIEDARKKEI
HHRIKNNLQVISSLLDLQAETFNHRETVTAPEILEAFRESQNRVISMSLIHEELYRGEGTDTLNFSVYLRKLAEKLLQTY
SLSNKNISLFMNLEENAFFNMDVAVPLGIIVNELVSNSIKHAFTEQNGEVQIQLFREEQNNEIHKSLFSLTISDNGKGIS
ENIELGSVKSLGLQLVNTLVDQVDGEIELERAGGTKFRITFWAAERS
>Mature_526_residues
GKNIRSSGIEIIGDTPWGARLCQFELKESYDHLEELVQERTVQLEKAYKRLKESEIDLSEAQKMAHIGSWKWDIVTGELY
WSDELYLIFGLDPQEFRPAYNSFFNYIHPGDRDFVDNAIKKALNGEQLYDNDHRIISADGEERIVHSHGEVIFDEKNTPV
RMRGTLQDITERTKIEDSLLLSEERYRSFIQNFTGIAFQQDEDLNLEFVKGNVEEITGYSEEELMSKKRWRKIVEKQDLP
LFLKKEREIKNARSPYSGKLSYRIRCKDGKIKWVHEVYQKIPGKNGRPDNHQSTITDVTERIKAKETLVKIEDARKKEIH
HRIKNNLQVISSLLDLQAETFNHRETVTAPEILEAFRESQNRVISMSLIHEELYRGEGTDTLNFSVYLRKLAEKLLQTYS
LSNKNISLFMNLEENAFFNMDVAVPLGIIVNELVSNSIKHAFTEQNGEVQIQLFREEQNNEIHKSLFSLTISDNGKGISE
NIELGSVKSLGLQLVNTLVDQVDGEIELERAGGTKFRITFWAAERS

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 61069; Mature: 60938

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNIRSSGIEIIGDTPWGARLCQFELKESYDHLEELVQERTVQLEKAYKRLKESEIDLS
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EAQKMAHIGSWKWDIVTGELYWSDELYLIFGLDPQEFRPAYNSFFNYIHPGDRDFVDNAI
HHHHHHHCCCCEEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
KKALNGEQLYDNDHRIISADGEERIVHSHGEVIFDEKNTPVRMRGTLQDITERTKIEDSL
HHHCCCCCEECCCCEEEECCCCHHHEECCCCEEEECCCCCEEECCCHHHHHHHHHHHHHH
LLSEERYRSFIQNFTGIAFQQDEDLNLEFVKGNVEEITGYSEEELMSKKRWRKIVEKQDL
HHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
PLFLKKEREIKNARSPYSGKLSYRIRCKDGKIKWVHEVYQKIPGKNGRPDNHQSTITDVT
CHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
ERIKAKETLVKIEDARKKEIHHRIKNNLQVISSLLDLQAETFNHRETVTAPEILEAFRES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QNRVISMSLIHEELYRGEGTDTLNFSVYLRKLAEKLLQTYSLSNKNISLFMNLEENAFFN
CCCEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEE
MDVAVPLGIIVNELVSNSIKHAFTEQNGEVQIQLFREEQNNEIHKSLFSLTISDNGKGIS
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHEEEECCCCCCCC
ENIELGSVKSLGLQLVNTLVDQVDGEIELERAGGTKFRITFWAAERS
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCC
>Mature Secondary Structure 
GKNIRSSGIEIIGDTPWGARLCQFELKESYDHLEELVQERTVQLEKAYKRLKESEIDLS
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EAQKMAHIGSWKWDIVTGELYWSDELYLIFGLDPQEFRPAYNSFFNYIHPGDRDFVDNAI
HHHHHHHCCCCEEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
KKALNGEQLYDNDHRIISADGEERIVHSHGEVIFDEKNTPVRMRGTLQDITERTKIEDSL
HHHCCCCCEECCCCEEEECCCCHHHEECCCCEEEECCCCCEEECCCHHHHHHHHHHHHHH
LLSEERYRSFIQNFTGIAFQQDEDLNLEFVKGNVEEITGYSEEELMSKKRWRKIVEKQDL
HHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
PLFLKKEREIKNARSPYSGKLSYRIRCKDGKIKWVHEVYQKIPGKNGRPDNHQSTITDVT
CHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
ERIKAKETLVKIEDARKKEIHHRIKNNLQVISSLLDLQAETFNHRETVTAPEILEAFRES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QNRVISMSLIHEELYRGEGTDTLNFSVYLRKLAEKLLQTYSLSNKNISLFMNLEENAFFN
CCCEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEE
MDVAVPLGIIVNELVSNSIKHAFTEQNGEVQIQLFREEQNNEIHKSLFSLTISDNGKGIS
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHEEEECCCCCCCC
ENIELGSVKSLGLQLVNTLVDQVDGEIELERAGGTKFRITFWAAERS
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]