| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226992
Identifier: 21226992
GI number: 21226992
Start: 1050955
End: 1051872
Strand: Reverse
Name: 21226992
Synonym: MM_0890
Alternate gene names: NA
Gene position: 1051872-1050955 (Counterclockwise)
Preceding gene: 21226993
Following gene: 21226991
Centisome position: 25.68
GC content: 43.57
Gene sequence:
>918_bases GTGAGTAACATTCAAAAAATCAGAGCAGAACTCCTGATTGATGAATTTCGCAGCATCTATTCCCGGGTAAAGGGCCTTGA AGATGCCGAAGTGATGGGAAGTCCCTCTCCTGAACTGTATACCGTGTTTAAAAGGCTGGATGAACTAGCAGCTCTGGATG TAGATGAAAAGTTTATTTATGAAATCCTTAAAAGCCCGGATTTTGATTCTCTCATAGCTGAGATCTCTCGCTTCAGGTTT TTATACAATCTCAGGCTTGAAAACGAAAAAGCAAAAAGCCTTCTTGAAAGCTCCAGTATATGGGAAACTCTCCGGAATTT TACATTTTATCCTAACTACCTGCAGCTTGCCAGGACCGAATATACAGGTTCAGGTCTTAAATCCGGAGATTGTGTGCTTT TCCTTGGCAGTGGCCCCCTCCCTCTTAGTCTTATTGAGCTCTGTCATGAATACAACCTTTCTGGAATAGGAGTTGAACAG GACGGAAAAAGGGCAGATCTGTCCCGGCAGGTAATTGCCCGTCTGGGCCTCTCCGAAAGAATTAAAATAATAGATGGAAA CCATTTCAGCCTGCCACTTGAAACCCGCTGTGACCTTTATATGGTCGCTGCCCAGGCCGAACCCAAGAGCGAAGTATTTG AACAGCTAGCCAGAGTCCTGCCCGAAGGAAGTAAAGTCTCCTACCGCCTTTACGAAAAAGGCCTCCGGAGAATTCTGGAT GGCAGTTCACTCTTTGAATTGCCTTCAGGTTTTGAAGAATATCTCAGGGTTCAGCCTGAACCGCCGGTTAATAATACGGT TGTATTTCTTAAAAAGAGACAAAAACGCTTCCAGGCTATTGCAGTTCGATCTGTGGTGCTTTATCTCAAAACCATCTTTT TTAATTTTTTACTAAGATTATGTCTCGTATGCAGATGA
Upstream 100 bases:
>100_bases CTCTATCGTCCGGTCCTGCCCGAGCAGACAGGAGGCTTTAGACTAATAAAAGAAGTCTGCCCCGCTGGAAAAGAAAACAA TACTCTGGTCTTTCTGGAGT
Downstream 100 bases:
>100_bases TCCGTTATTTTACTTCAACTTCGTATTTGTTTCATTTTAGATGATTTTTCTATAGTGCCAGAATGTAACTGGAATTATAC AACGTTTAACCTTTTGCGTC
Product: putative methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSNIQKIRAELLIDEFRSIYSRVKGLEDAEVMGSPSPELYTVFKRLDELAALDVDEKFIYEILKSPDFDSLIAEISRFRF LYNLRLENEKAKSLLESSSIWETLRNFTFYPNYLQLARTEYTGSGLKSGDCVLFLGSGPLPLSLIELCHEYNLSGIGVEQ DGKRADLSRQVIARLGLSERIKIIDGNHFSLPLETRCDLYMVAAQAEPKSEVFEQLARVLPEGSKVSYRLYEKGLRRILD GSSLFELPSGFEEYLRVQPEPPVNNTVVFLKKRQKRFQAIAVRSVVLYLKTIFFNFLLRLCLVCR
Sequences:
>Translated_305_residues MSNIQKIRAELLIDEFRSIYSRVKGLEDAEVMGSPSPELYTVFKRLDELAALDVDEKFIYEILKSPDFDSLIAEISRFRF LYNLRLENEKAKSLLESSSIWETLRNFTFYPNYLQLARTEYTGSGLKSGDCVLFLGSGPLPLSLIELCHEYNLSGIGVEQ DGKRADLSRQVIARLGLSERIKIIDGNHFSLPLETRCDLYMVAAQAEPKSEVFEQLARVLPEGSKVSYRLYEKGLRRILD GSSLFELPSGFEEYLRVQPEPPVNNTVVFLKKRQKRFQAIAVRSVVLYLKTIFFNFLLRLCLVCR >Mature_304_residues SNIQKIRAELLIDEFRSIYSRVKGLEDAEVMGSPSPELYTVFKRLDELAALDVDEKFIYEILKSPDFDSLIAEISRFRFL YNLRLENEKAKSLLESSSIWETLRNFTFYPNYLQLARTEYTGSGLKSGDCVLFLGSGPLPLSLIELCHEYNLSGIGVEQD GKRADLSRQVIARLGLSERIKIIDGNHFSLPLETRCDLYMVAAQAEPKSEVFEQLARVLPEGSKVSYRLYEKGLRRILDG SSLFELPSGFEEYLRVQPEPPVNNTVVFLKKRQKRFQAIAVRSVVLYLKTIFFNFLLRLCLVCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35019; Mature: 34888
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS51142 NAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIQKIRAELLIDEFRSIYSRVKGLEDAEVMGSPSPELYTVFKRLDELAALDVDEKFIY CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH EILKSPDFDSLIAEISRFRFLYNLRLENEKAKSLLESSSIWETLRNFTFYPNYLQLARTE HHHCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YTGSGLKSGDCVLFLGSGPLPLSLIELCHEYNLSGIGVEQDGKRADLSRQVIARLGLSER HCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC IKIIDGNHFSLPLETRCDLYMVAAQAEPKSEVFEQLARVLPEGSKVSYRLYEKGLRRILD EEEEECCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC GSSLFELPSGFEEYLRVQPEPPVNNTVVFLKKRQKRFQAIAVRSVVLYLKTIFFNFLLRL CCHHHHCCCCHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLVCR HHHCC >Mature Secondary Structure SNIQKIRAELLIDEFRSIYSRVKGLEDAEVMGSPSPELYTVFKRLDELAALDVDEKFIY CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH EILKSPDFDSLIAEISRFRFLYNLRLENEKAKSLLESSSIWETLRNFTFYPNYLQLARTE HHHCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YTGSGLKSGDCVLFLGSGPLPLSLIELCHEYNLSGIGVEQDGKRADLSRQVIARLGLSER HCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC IKIIDGNHFSLPLETRCDLYMVAAQAEPKSEVFEQLARVLPEGSKVSYRLYEKGLRRILD EEEEECCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC GSSLFELPSGFEEYLRVQPEPPVNNTVVFLKKRQKRFQAIAVRSVVLYLKTIFFNFLLRL CCHHHHCCCCHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLVCR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA