| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226952
Identifier: 21226952
GI number: 21226952
Start: 1004285
End: 1004518
Strand: Reverse
Name: 21226952
Synonym: MM_0850
Alternate gene names: NA
Gene position: 1004518-1004285 (Counterclockwise)
Preceding gene: 21226953
Following gene: 21226949
Centisome position: 24.52
GC content: 44.44
Gene sequence:
>234_bases ATGGCAGTAAGAAACCCGGTAGATTTGATAGCACTTATACTTGTCATCGTGGGCGGATTAAACTGGGGGCTTGTAGGGCT TCTGAATTTTAATCTTGTATCTGCTATCTTTGGAGAAGGAAGTGCTCTGTCGAGAATCATCTACATACTTGTTGGTCTTG CAGCGCTTTATACGATTTATTTCGCCGTAAGAGCTGATACGTATCACGCTGGAGATACCACGGTACGCCACTGA
Upstream 100 bases:
>100_bases TTAGTCACATATAAATACAAGTACATCCAATTTTAATATGGGATTTTTATATTTTTCCTCACTATAAAATATAAAATACC AAAAATAGGGAGTGATATCT
Downstream 100 bases:
>100_bases GTAAAAAGAGATTGAAAAACTCCTTTCCGGTGTAATACTGTAAAAGGAGCTTTAACCAGCTATTATTTTTTTAGAAAGCT GGATATAATATTAATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAVRNPVDLIALILVIVGGLNWGLVGLLNFNLVSAIFGEGSALSRIIYILVGLAALYTIYFAVRADTYHAGDTTVRH
Sequences:
>Translated_77_residues MAVRNPVDLIALILVIVGGLNWGLVGLLNFNLVSAIFGEGSALSRIIYILVGLAALYTIYFAVRADTYHAGDTTVRH >Mature_76_residues AVRNPVDLIALILVIVGGLNWGLVGLLNFNLVSAIFGEGSALSRIIYILVGLAALYTIYFAVRADTYHAGDTTVRH
Specific function: Unknown
COG id: COG2155
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8274; Mature: 8143
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRNPVDLIALILVIVGGLNWGLVGLLNFNLVSAIFGEGSALSRIIYILVGLAALYTIY CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FAVRADTYHAGDTTVRH HHHHCCCEECCCCCCCC >Mature Secondary Structure AVRNPVDLIALILVIVGGLNWGLVGLLNFNLVSAIFGEGSALSRIIYILVGLAALYTIY CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FAVRADTYHAGDTTVRH HHHHCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA