Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226949

Identifier: 21226949

GI number: 21226949

Start: 1001829

End: 1002158

Strand: Reverse

Name: 21226949

Synonym: MM_0847

Alternate gene names: NA

Gene position: 1002158-1001829 (Counterclockwise)

Preceding gene: 21226952

Following gene: 21226948

Centisome position: 24.46

GC content: 49.09

Gene sequence:

>330_bases
ATGCGAATCTGGGATATCCCTCCTGAGAATATGTGCCGGAACCACCTTTTAGGGGAGCACCGTGAATTGCACGCCCTGTG
GTCCATAATAACCAATAACAAGAAAGCTTATGCCCACCACCCCGAAACCCTGCGCTGGAGAGGGAAATTAAAGGCCCTCT
ACTTGCGTCATGAAGCCCTTGTAAGGGAAATGACTAAAAGGGGGTATAAGCACCATACCCCGCTCGATCCTGCTCTGGCA
ACAGGAAAAGCTGTTCAGGATGAGTTTGTGAATACATATGAAGAACAGGTCCGGATCCTGAAAGAAAGAGGATGTGAGTG
CAGGGTTTGA

Upstream 100 bases:

>100_bases
AAACTGCAGGTATTAAGTTAAGGCTCAAATATAATTTCAGGTTTAAAATAGTAAAATTCCTGCCGAAAGTCCTTTCTGAG
ATGCATTCAAAGTTCATCTT

Downstream 100 bases:

>100_bases
TTTTTTCTTTTTCAATCCTTTTCATTTTGTCCTGGTTTAATATTTATATTTATAATTATCGATAATCTTTTATAGTTTTA
TGGTAATTTATAGAGAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEALVREMTKRGYKHHTPLDPALA
TGKAVQDEFVNTYEEQVRILKERGCECRV

Sequences:

>Translated_109_residues
MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEALVREMTKRGYKHHTPLDPALA
TGKAVQDEFVNTYEEQVRILKERGCECRV
>Mature_109_residues
MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEALVREMTKRGYKHHTPLDPALA
TGKAVQDEFVNTYEEQVRILKERGCECRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12965; Mature: 12965

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEAL
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VREMTKRGYKHHTPLDPALATGKAVQDEFVNTYEEQVRILKERGCECRV
HHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEAL
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VREMTKRGYKHHTPLDPALATGKAVQDEFVNTYEEQVRILKERGCECRV
HHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA