| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226949
Identifier: 21226949
GI number: 21226949
Start: 1001829
End: 1002158
Strand: Reverse
Name: 21226949
Synonym: MM_0847
Alternate gene names: NA
Gene position: 1002158-1001829 (Counterclockwise)
Preceding gene: 21226952
Following gene: 21226948
Centisome position: 24.46
GC content: 49.09
Gene sequence:
>330_bases ATGCGAATCTGGGATATCCCTCCTGAGAATATGTGCCGGAACCACCTTTTAGGGGAGCACCGTGAATTGCACGCCCTGTG GTCCATAATAACCAATAACAAGAAAGCTTATGCCCACCACCCCGAAACCCTGCGCTGGAGAGGGAAATTAAAGGCCCTCT ACTTGCGTCATGAAGCCCTTGTAAGGGAAATGACTAAAAGGGGGTATAAGCACCATACCCCGCTCGATCCTGCTCTGGCA ACAGGAAAAGCTGTTCAGGATGAGTTTGTGAATACATATGAAGAACAGGTCCGGATCCTGAAAGAAAGAGGATGTGAGTG CAGGGTTTGA
Upstream 100 bases:
>100_bases AAACTGCAGGTATTAAGTTAAGGCTCAAATATAATTTCAGGTTTAAAATAGTAAAATTCCTGCCGAAAGTCCTTTCTGAG ATGCATTCAAAGTTCATCTT
Downstream 100 bases:
>100_bases TTTTTTCTTTTTCAATCCTTTTCATTTTGTCCTGGTTTAATATTTATATTTATAATTATCGATAATCTTTTATAGTTTTA TGGTAATTTATAGAGAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEALVREMTKRGYKHHTPLDPALA TGKAVQDEFVNTYEEQVRILKERGCECRV
Sequences:
>Translated_109_residues MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEALVREMTKRGYKHHTPLDPALA TGKAVQDEFVNTYEEQVRILKERGCECRV >Mature_109_residues MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEALVREMTKRGYKHHTPLDPALA TGKAVQDEFVNTYEEQVRILKERGCECRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12965; Mature: 12965
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEAL CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VREMTKRGYKHHTPLDPALATGKAVQDEFVNTYEEQVRILKERGCECRV HHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRIWDIPPENMCRNHLLGEHRELHALWSIITNNKKAYAHHPETLRWRGKLKALYLRHEAL CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VREMTKRGYKHHTPLDPALATGKAVQDEFVNTYEEQVRILKERGCECRV HHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA