| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226948
Identifier: 21226948
GI number: 21226948
Start: 1001005
End: 1001601
Strand: Reverse
Name: 21226948
Synonym: MM_0846
Alternate gene names: NA
Gene position: 1001601-1001005 (Counterclockwise)
Preceding gene: 21226949
Following gene: 21226947
Centisome position: 24.45
GC content: 43.89
Gene sequence:
>597_bases ATGAAAATCGTGCTGGATGAAGAGGAAATAGGGGTTCTTGAATGCATAAAAGAAGCCCATATGGATAGAGGCTTTCATAT TCGGGATATAATCAAAAAAGCAAAAGCCGGATACGGATTATCAAGGTCAACAGTTTATGAAATCGTAGGCTATCTCGAAT TCCACGGTCTTCTAAAAACGAACGAACACGGTAACCGGGAACTTGACCTGAACATCAGCTATTTTGTAACCTGCACGGGC TGCGGGAAAGATATCCCTGGAAACGAATATTTTAAAGAAAACGGGAAAGCGGTGTGTGAAGACTGTTATCTGGAGGAGCA CCAGAGAATCAAGTTTGCGGACCCTGTGGCAGTGCGTTCCAAAAAGCTTTTCAGAAAACAGCACGGGTTTGAAGGGACTG AAGGCCTGACAGAGCTGCAAAAAGAAATCTACAGTTTCATCATTGAGGAAGGAGGGTCTACCCCTGAAATGATTTCGAAG CTCTTCAAGTTGACCCTTCAGGAGACCAGGAACCAGCTTGCGATACTGAGGCACTGTGAACTTTTAAAGTGGAGAAAAAT GGGAGACGAAATGTATATGGTGCCTTTTGATTCCTGA
Upstream 100 bases:
>100_bases AACACACGCTAAATTAAGAAAATTAAGCAGGCATGAGTTTTTGAGACGTGTCTTGCTCAGAAACTGTTTCACTGCTGGTC AGGAATTTCAAGGGACTTAA
Downstream 100 bases:
>100_bases ACCATCCATAATAACCGGCATGTTTAGAGGGTGAAAGTTTGACTGAAAAAATTGATATGGACGAAAGAGCGAAAGCAATG GCAGAAGAAATCCCTGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKIVLDEEEIGVLECIKEAHMDRGFHIRDIIKKAKAGYGLSRSTVYEIVGYLEFHGLLKTNEHGNRELDLNISYFVTCTG CGKDIPGNEYFKENGKAVCEDCYLEEHQRIKFADPVAVRSKKLFRKQHGFEGTEGLTELQKEIYSFIIEEGGSTPEMISK LFKLTLQETRNQLAILRHCELLKWRKMGDEMYMVPFDS
Sequences:
>Translated_198_residues MKIVLDEEEIGVLECIKEAHMDRGFHIRDIIKKAKAGYGLSRSTVYEIVGYLEFHGLLKTNEHGNRELDLNISYFVTCTG CGKDIPGNEYFKENGKAVCEDCYLEEHQRIKFADPVAVRSKKLFRKQHGFEGTEGLTELQKEIYSFIIEEGGSTPEMISK LFKLTLQETRNQLAILRHCELLKWRKMGDEMYMVPFDS >Mature_198_residues MKIVLDEEEIGVLECIKEAHMDRGFHIRDIIKKAKAGYGLSRSTVYEIVGYLEFHGLLKTNEHGNRELDLNISYFVTCTG CGKDIPGNEYFKENGKAVCEDCYLEEHQRIKFADPVAVRSKKLFRKQHGFEGTEGLTELQKEIYSFIIEEGGSTPEMISK LFKLTLQETRNQLAILRHCELLKWRKMGDEMYMVPFDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22879; Mature: 22879
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVLDEEEIGVLECIKEAHMDRGFHIRDIIKKAKAGYGLSRSTVYEIVGYLEFHGLLKT CEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC NEHGNRELDLNISYFVTCTGCGKDIPGNEYFKENGKAVCEDCYLEEHQRIKFADPVAVRS CCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH KKLFRKQHGFEGTEGLTELQKEIYSFIIEEGGSTPEMISKLFKLTLQETRNQLAILRHCE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLKWRKMGDEMYMVPFDS HHHHHHCCCEEEEEECCC >Mature Secondary Structure MKIVLDEEEIGVLECIKEAHMDRGFHIRDIIKKAKAGYGLSRSTVYEIVGYLEFHGLLKT CEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC NEHGNRELDLNISYFVTCTGCGKDIPGNEYFKENGKAVCEDCYLEEHQRIKFADPVAVRS CCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH KKLFRKQHGFEGTEGLTELQKEIYSFIIEEGGSTPEMISKLFKLTLQETRNQLAILRHCE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLKWRKMGDEMYMVPFDS HHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA