| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is proB [H]
Identifier: 21226920
GI number: 21226920
Start: 968646
End: 969803
Strand: Reverse
Name: proB [H]
Synonym: MM_0818
Alternate gene names: 21226920
Gene position: 969803-968646 (Counterclockwise)
Preceding gene: 21226921
Following gene: 21226919
Centisome position: 23.67
GC content: 45.68
Gene sequence:
>1158_bases TTGACAGAAAGAGAACAATTTTTCCGTGATGTTAATAAAATCGTCATTAAGATCGGAACTTCTTCAATTACCAGAAAGGG CTGTGACCATACCAGGGAAAACTGCAACATTGACCCGGCATTTATGGAAAGCATAGCCTTCCAGGTCTCAGAGCTCCGAA AGCAGGGGAAAGAAGTAATTATTGTGAGTTCGGGAGCAATAGGTGTCGGGCTGAATGAGCTGGGCATAGCCCCCAAACCC CGTGAGATCCCTATCAGACAGGCAGCTGCAGCGGTCGGGCAGAGTATGCTGATGCAGGACTGGAGCAGAGCTTTTTCCAG ATACGGAATGAAGGTTGCCCAGATCCTTCTTACCTATGAATTCTATTCTGATAGAGTAACTTACCTCAACCTGAGAAACA GCATCTCAACCCTGCTGGAGTATGGTGTTGTCCCGATAATAAACGAAAACGACTGTACCTGTACAAACGAGATTGAAGCA ATCTTCGGGGACAATGACAAGCTCTCTGCAATGGTTGCGAGCAAAATCGATGCTGATCTTCTGATTATCCTTTCGGATAT TGATGGGCTTTTTGACAGGAACCCGAAAACTCACATTGACGCAAAGCTTCTGACCATTGTGAAAAAGATCACGCCTGAGA TTGAAAGTTATGGGGGCGACCCTACAAGCTTCAAAGGCGTTGGCGGGATGCGGACCAAAATAAAAGCTGCAAAAATCTGC AGTATGGCAGGCTGCTATGTAGTTATTGCAAACAGCGATGTAGAGGACGTCATCCTGAAAATAGCCTCAGGGGAAGAAAT AGGGACCCTTTTCCTTGCTGAACGGCATATCCAGAAAAACCGCGCTCGCTGGATTATCCTTGCCAGGGCTTCAGGAACGG TCCGTGTAGATGCCGGAGCAAAAGCTGCTGTCCTCGGGAAAAATAGCCTTCTCCCGGCAGGCGTTGTGGATGTGGAAGGG ACATTTGATAGGGGAGATGTCGTGAAACTCGAATGTGACGGCAAAATATTTGCAAAAGGGATTACCGACTATACCTCTGA AGAGTTAATTAAAATAAAAGGAGTTCATACAGACCAGATTGAAAACGTTCTGGGCTACAGTAATTACAACAACGTGATAA AAAAGGAAAATATCGGCATACTGGAAGAGTTAAATTGA
Upstream 100 bases:
>100_bases AATCGAAATACCAGCGCAGGTTAAGTGCAAAAACCGGAAACCCGGCTATTATAGAAATCAAGCGCAGCCGCTTTCCAAAT AACTTTAAGAGGCACTTCTA
Downstream 100 bases:
>100_bases GCATCGGGTTTGTAAGAGTTTCAGGACCTTCTGGTTCTTTACAGGTAATTTACGGTAATTTAAGGTTAATTTAAGGTTAA TTTAAGGTTAATTTAAGTTT
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTEREQFFRDVNKIVIKIGTSSITRKGCDHTRENCNIDPAFMESIAFQVSELRKQGKEVIIVSSGAIGVGLNELGIAPKP REIPIRQAAAAVGQSMLMQDWSRAFSRYGMKVAQILLTYEFYSDRVTYLNLRNSISTLLEYGVVPIINENDCTCTNEIEA IFGDNDKLSAMVASKIDADLLIILSDIDGLFDRNPKTHIDAKLLTIVKKITPEIESYGGDPTSFKGVGGMRTKIKAAKIC SMAGCYVVIANSDVEDVILKIASGEEIGTLFLAERHIQKNRARWIILARASGTVRVDAGAKAAVLGKNSLLPAGVVDVEG TFDRGDVVKLECDGKIFAKGITDYTSEELIKIKGVHTDQIENVLGYSNYNNVIKKENIGILEELN
Sequences:
>Translated_385_residues MTEREQFFRDVNKIVIKIGTSSITRKGCDHTRENCNIDPAFMESIAFQVSELRKQGKEVIIVSSGAIGVGLNELGIAPKP REIPIRQAAAAVGQSMLMQDWSRAFSRYGMKVAQILLTYEFYSDRVTYLNLRNSISTLLEYGVVPIINENDCTCTNEIEA IFGDNDKLSAMVASKIDADLLIILSDIDGLFDRNPKTHIDAKLLTIVKKITPEIESYGGDPTSFKGVGGMRTKIKAAKIC SMAGCYVVIANSDVEDVILKIASGEEIGTLFLAERHIQKNRARWIILARASGTVRVDAGAKAAVLGKNSLLPAGVVDVEG TFDRGDVVKLECDGKIFAKGITDYTSEELIKIKGVHTDQIENVLGYSNYNNVIKKENIGILEELN >Mature_384_residues TEREQFFRDVNKIVIKIGTSSITRKGCDHTRENCNIDPAFMESIAFQVSELRKQGKEVIIVSSGAIGVGLNELGIAPKPR EIPIRQAAAAVGQSMLMQDWSRAFSRYGMKVAQILLTYEFYSDRVTYLNLRNSISTLLEYGVVPIINENDCTCTNEIEAI FGDNDKLSAMVASKIDADLLIILSDIDGLFDRNPKTHIDAKLLTIVKKITPEIESYGGDPTSFKGVGGMRTKIKAAKICS MAGCYVVIANSDVEDVILKIASGEEIGTLFLAERHIQKNRARWIILARASGTVRVDAGAKAAVLGKNSLLPAGVVDVEGT FDRGDVVKLECDGKIFAKGITDYTSEELIKIKGVHTDQIENVLGYSNYNNVIKKENIGILEELN
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI62912457, Length=294, Percent_Identity=32.9931972789116, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI21361368, Length=296, Percent_Identity=32.7702702702703, Blast_Score=132, Evalue=8e-31, Organism=Escherichia coli, GI1786437, Length=359, Percent_Identity=38.7186629526462, Blast_Score=239, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17569967, Length=277, Percent_Identity=31.7689530685921, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17569969, Length=277, Percent_Identity=31.7689530685921, Blast_Score=130, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6320506, Length=424, Percent_Identity=36.3207547169811, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6321822, Length=422, Percent_Identity=35.3080568720379, Blast_Score=208, Evalue=1e-54, Organism=Drosophila melanogaster, GI21357643, Length=307, Percent_Identity=34.8534201954397, Blast_Score=136, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 42258; Mature: 42127
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEREQFFRDVNKIVIKIGTSSITRKGCDHTRENCNIDPAFMESIAFQVSELRKQGKEVI CCCHHHHHHHHHHEEEEECCCHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEEE IVSSGAIGVGLNELGIAPKPREIPIRQAAAAVGQSMLMQDWSRAFSRYGMKVAQILLTYE EEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FYSDRVTYLNLRNSISTLLEYGVVPIINENDCTCTNEIEAIFGDNDKLSAMVASKIDADL HHCCCEEEEEHHHHHHHHHHCCCEEEECCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCE LIILSDIDGLFDRNPKTHIDAKLLTIVKKITPEIESYGGDPTSFKGVGGMRTKIKAAKIC EEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH SMAGCYVVIANSDVEDVILKIASGEEIGTLFLAERHIQKNRARWIILARASGTVRVDAGA HCCCEEEEEECCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCC KAAVLGKNSLLPAGVVDVEGTFDRGDVVKLECDGKIFAKGITDYTSEELIKIKGVHTDQI EEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEECCCHHHH ENVLGYSNYNNVIKKENIGILEELN HHHHCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure TEREQFFRDVNKIVIKIGTSSITRKGCDHTRENCNIDPAFMESIAFQVSELRKQGKEVI CCHHHHHHHHHHEEEEECCCHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEEE IVSSGAIGVGLNELGIAPKPREIPIRQAAAAVGQSMLMQDWSRAFSRYGMKVAQILLTYE EEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FYSDRVTYLNLRNSISTLLEYGVVPIINENDCTCTNEIEAIFGDNDKLSAMVASKIDADL HHCCCEEEEEHHHHHHHHHHCCCEEEECCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCE LIILSDIDGLFDRNPKTHIDAKLLTIVKKITPEIESYGGDPTSFKGVGGMRTKIKAAKIC EEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH SMAGCYVVIANSDVEDVILKIASGEEIGTLFLAERHIQKNRARWIILARASGTVRVDAGA HCCCEEEEEECCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCC KAAVLGKNSLLPAGVVDVEGTFDRGDVVKLECDGKIFAKGITDYTSEELIKIKGVHTDQI EEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEECCCHHHH ENVLGYSNYNNVIKKENIGILEELN HHHHCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11844777; 11932238 [H]