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The map label for this gene is ftsY [C]

Identifier: 21226912

GI number: 21226912

Start: 960228

End: 961487

Strand: Direct

Name: ftsY [C]

Synonym: MM_0810

Alternate gene names: 21226912

Gene position: 960228-961487 (Clockwise)

Preceding gene: 21226911

Following gene: 21226916

Centisome position: 23.44

GC content: 45.95

Gene sequence:

>1260_bases
GTGTTCAATAAATTTAAAGAGAAACTTGGTAGTTTTAAGAAGGCATTCAGCAAAACGATTGATGAGAAAGCAGTGGAAGT
CGAGCCGGTAATCATCGAGCAGGTGCCTGAAAGCGAAGAAAGCCTCGAAGAGGAAATCGAGCCCATAATAGAGGAAGAGA
CTATCGAGGCTGCTCTTGAAGAAGAAATTCCCGAAAAGGGTGCTGTTCCTGAGGTAATCTCCCATGTTTCGGTAGAGGAC
CTGAAGAAAGCTGAATACAGGAAAAAAGTTGAAGACAGAAAAAAGGCTGCAGAGAAGAAAAAAGAGGAAAAAGAGGAAGT
AAAACCCGTTGAAGAGAAAAAGTCTTTTTTCAAAAAGCTTGCCCCGAAAGTCGGGTTTACCCAGAAAGCCAAAGCCCTTG
TGTTTAACAGGGAAGTATACCTGGATGAAAAAGACCTTGAAGAACCCCTCTGGGAACTTGAAATGGGCCTCCTGGAAAGC
GATCTTGCGGTATCGGTATCTGAGGCAATTGTTGAGTCCGTGAAGAACCAGCTCACTGGAACGACAAAAAGGATTGGGAG
CAATACCGGAGATATAGTTGAAGAAGCCCTGAAGAAAGCGATTCTTGATGTGGTATCTGCCAATACCTTTGATTTTGATG
AGTATGTCAAAAACCGGCCAAAGCCAGTACATATTGTTTTTGTAGGGATTAACGGGACAGGAAAGACGACGTCCATTTCA
AAAATGACGCACAGACTGCTTAAGTTGGGTTATTCTGTGGTGCTTGCTGCCGGAGACACGTTCAGGGCAGGTGCTATTGA
CCAGCTGGGGATTCATGCAGACAGGCTCGGGGTAAAGATGATAAAGCACCAGGCAGGAGCCGACCCTGCAGCAGTTATTT
ATGATGCTGTCCAGTATGCAAAAGCGCATAATATCGATTTTGTCCTCTCTGACACGGCAGGACGTATGCATACAAATATG
AACCTCATGGCCCAGATGGAAAAGATCTGCAGGGTAAGCTCTCCTGACCTTATTATTTTCGTGGACGAAGCCGTAGCCGG
AAACGATGCTGTGGAAAGGGCTGCCCAGTTCAATGACGCTGTCCCTATCGATGGGTCCATCCTGACAAAAATTGATGCTG
ATGCCAAGGGAGGAGCTGCCATATCCATTGCTTACATCACAGGCAAGCCGATCCTCTTTTTCGGAGTAGGCCAGGGATAT
GAAGACCTCAAAAAATTCGAACCCGAATGGTTTGTAGACCAGCTTTTCGGGCAGTCATAA

Upstream 100 bases:

>100_bases
TAATTAGTTCGTAAACTTAACTAACTCGAATTATTGATAATTTCAATCATTCGTGAACTTTATTTACCTATTTTTTACTG
ATCTTTTCGGGATGGATCCT

Downstream 100 bases:

>100_bases
ATCTTCCAGACCCGGTTTGTGCTGAGGAATGTTCAGGATAGATATGAGTAAACTGAAACCGGTCACAAACGGAAATATCA
GTAAAAAGAAAATTCCCGGA

Product: signal recognition particle subunit Ffh/SRP54

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MFNKFKEKLGSFKKAFSKTIDEKAVEVEPVIIEQVPESEESLEEEIEPIIEEETIEAALEEEIPEKGAVPEVISHVSVED
LKKAEYRKKVEDRKKAAEKKKEEKEEVKPVEEKKSFFKKLAPKVGFTQKAKALVFNREVYLDEKDLEEPLWELEMGLLES
DLAVSVSEAIVESVKNQLTGTTKRIGSNTGDIVEEALKKAILDVVSANTFDFDEYVKNRPKPVHIVFVGINGTGKTTSIS
KMTHRLLKLGYSVVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQAGADPAAVIYDAVQYAKAHNIDFVLSDTAGRMHTNM
NLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFNDAVPIDGSILTKIDADAKGGAAISIAYITGKPILFFGVGQGY
EDLKKFEPEWFVDQLFGQS

Sequences:

>Translated_419_residues
MFNKFKEKLGSFKKAFSKTIDEKAVEVEPVIIEQVPESEESLEEEIEPIIEEETIEAALEEEIPEKGAVPEVISHVSVED
LKKAEYRKKVEDRKKAAEKKKEEKEEVKPVEEKKSFFKKLAPKVGFTQKAKALVFNREVYLDEKDLEEPLWELEMGLLES
DLAVSVSEAIVESVKNQLTGTTKRIGSNTGDIVEEALKKAILDVVSANTFDFDEYVKNRPKPVHIVFVGINGTGKTTSIS
KMTHRLLKLGYSVVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQAGADPAAVIYDAVQYAKAHNIDFVLSDTAGRMHTNM
NLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFNDAVPIDGSILTKIDADAKGGAAISIAYITGKPILFFGVGQGY
EDLKKFEPEWFVDQLFGQS
>Mature_419_residues
MFNKFKEKLGSFKKAFSKTIDEKAVEVEPVIIEQVPESEESLEEEIEPIIEEETIEAALEEEIPEKGAVPEVISHVSVED
LKKAEYRKKVEDRKKAAEKKKEEKEEVKPVEEKKSFFKKLAPKVGFTQKAKALVFNREVYLDEKDLEEPLWELEMGLLES
DLAVSVSEAIVESVKNQLTGTTKRIGSNTGDIVEEALKKAILDVVSANTFDFDEYVKNRPKPVHIVFVGINGTGKTTSIS
KMTHRLLKLGYSVVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQAGADPAAVIYDAVQYAKAHNIDFVLSDTAGRMHTNM
NLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFNDAVPIDGSILTKIDADAKGGAAISIAYITGKPILFFGVGQGY
EDLKKFEPEWFVDQLFGQS

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=35.8552631578947, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=35.8552631578947, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI4507215, Length=277, Percent_Identity=29.9638989169675, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI226371618, Length=232, Percent_Identity=31.0344827586207, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI89061728, Length=130, Percent_Identity=32.3076923076923, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1789874, Length=203, Percent_Identity=43.3497536945813, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1788963, Length=278, Percent_Identity=33.8129496402878, Blast_Score=154, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI193206261, Length=304, Percent_Identity=36.8421052631579, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17539958, Length=283, Percent_Identity=27.9151943462898, Blast_Score=135, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6325345, Length=265, Percent_Identity=33.2075471698113, Blast_Score=150, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=331, Percent_Identity=29.9093655589124, Blast_Score=149, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=34.8837209302326, Blast_Score=175, Evalue=7e-44,
Organism=Drosophila melanogaster, GI17647949, Length=283, Percent_Identity=30.3886925795053, Blast_Score=138, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 46381; Mature: 46381

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKFKEKLGSFKKAFSKTIDEKAVEVEPVIIEQVPESEESLEEEIEPIIEEETIEAALE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EEIPEKGAVPEVISHVSVEDLKKAEYRKKVEDRKKAAEKKKEEKEEVKPVEEKKSFFKKL
HHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
APKVGFTQKAKALVFNREVYLDEKDLEEPLWELEMGLLESDLAVSVSEAIVESVKNQLTG
CCCCCCCHHHHHHEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTKRIGSNTGDIVEEALKKAILDVVSANTFDFDEYVKNRPKPVHIVFVGINGTGKTTSIS
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEEECCCCCCHHHH
KMTHRLLKLGYSVVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQAGADPAAVIYDAVQYA
HHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KAHNIDFVLSDTAGRMHTNMNLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFNDA
HHCCCEEEEECCCCCHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCC
VPIDGSILTKIDADAKGGAAISIAYITGKPILFFGVGQGYEDLKKFEPEWFVDQLFGQS
CCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MFNKFKEKLGSFKKAFSKTIDEKAVEVEPVIIEQVPESEESLEEEIEPIIEEETIEAALE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EEIPEKGAVPEVISHVSVEDLKKAEYRKKVEDRKKAAEKKKEEKEEVKPVEEKKSFFKKL
HHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
APKVGFTQKAKALVFNREVYLDEKDLEEPLWELEMGLLESDLAVSVSEAIVESVKNQLTG
CCCCCCCHHHHHHEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTKRIGSNTGDIVEEALKKAILDVVSANTFDFDEYVKNRPKPVHIVFVGINGTGKTTSIS
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEEECCCCCCHHHH
KMTHRLLKLGYSVVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQAGADPAAVIYDAVQYA
HHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KAHNIDFVLSDTAGRMHTNMNLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFNDA
HHCCCEEEEECCCCCHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCC
VPIDGSILTKIDADAKGGAAISIAYITGKPILFFGVGQGYEDLKKFEPEWFVDQLFGQS
CCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]